ATAB2_ORYSJ
ID ATAB2_ORYSJ Reviewed; 392 AA.
AC Q6K9C1;
DT 15-FEB-2017, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 112.
DE RecName: Full=Protein TAB2 homolog, chloroplastic {ECO:0000305};
DE Flags: Precursor;
GN OrderedLocusNames=Os02g0610800 {ECO:0000312|EMBL:BAF09316.1};
GN ORFNames=OJ1476_F05.22 {ECO:0000312|EMBL:BAD19229.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- FUNCTION: Nuclear genome-encoded factor involved in the biogenesis of
CC photosystem I (PSI). Required for the accumulation of PSI during plant
CC development. Does not seem to be required for the translation of mRNAs
CC of the PSI subunits. {ECO:0000250|UniProtKB:B4FTR7}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000255}.
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DR EMBL; AP004063; BAD19229.1; -; Genomic_DNA.
DR EMBL; AP008208; BAF09316.1; -; Genomic_DNA.
DR EMBL; AP014958; BAS79711.1; -; Genomic_DNA.
DR EMBL; AK099736; BAG94275.1; -; mRNA.
DR RefSeq; XP_015627281.1; XM_015771795.1.
DR AlphaFoldDB; Q6K9C1; -.
DR STRING; 4530.OS02T0610800-01; -.
DR PaxDb; Q6K9C1; -.
DR PRIDE; Q6K9C1; -.
DR EnsemblPlants; Os02t0610800-01; Os02t0610800-01; Os02g0610800.
DR GeneID; 4329953; -.
DR Gramene; Os02t0610800-01; Os02t0610800-01; Os02g0610800.
DR KEGG; osa:4329953; -.
DR eggNOG; ENOG502QVJR; Eukaryota.
DR HOGENOM; CLU_058545_1_0_1; -.
DR InParanoid; Q6K9C1; -.
DR OMA; FFRRQMN; -.
DR OrthoDB; 1210582at2759; -.
DR Proteomes; UP000000763; Chromosome 2.
DR Proteomes; UP000059680; Chromosome 2.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR InterPro; IPR009472; Tab2-like.
DR PANTHER; PTHR34556; PTHR34556; 1.
DR Pfam; PF06485; Tab2_like; 1.
PE 2: Evidence at transcript level;
KW Chloroplast; Plastid; Reference proteome; Transit peptide.
FT TRANSIT 1..45
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 46..392
FT /note="Protein TAB2 homolog, chloroplastic"
FT /id="PRO_0000439004"
FT REGION 66..90
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 70..90
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 392 AA; 42690 MW; 57882B73D06D7958 CRC64;
MTTATAIVAG HGLALRRSLH LSKPSCATFS ARALPPAAHC CRTVVAAAAP SSRTCRCRSV
SSESSTAAAA DTADDEEEVT KSDSEEEEMD PLAEVCYLDP EADAEGIREW ELDFCSRPIL
DARGKKVWEL VVCDATLSLQ FTRFFPNTSI NSVTLRDALA SVATSLGVPL PDRARFFRSQ
MQTIISRACN ELGVKAVPSR RCVSLLLWLE ERYETVYSRH PGFQSGTKPL LTLDNPFPTS
LPENLFGDKW AFVQLPFSAV REEVESLERR YAFGAGLDLD LLGFELDENT LIPGVAVESS
RAKPLAAWMN GLEICSMEVD TGRANLILSA GVSTRYVYAG YQKSAATTQE AEAWEAAKKA
CGGLHFLAIQ ENLNSDGCVG FWLLLDLPPP PV