PP101_ARATH
ID PP101_ARATH Reviewed; 559 AA.
AC Q9C8T7;
DT 01-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-JUL-2008, sequence version 2.
DT 03-AUG-2022, entry version 106.
DE RecName: Full=Pentatricopeptide repeat-containing protein At1g63330;
GN OrderedLocusNames=At1g63330; ORFNames=F9N12.5;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAG52154.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AC022355; AAG52154.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE34087.1; -; Genomic_DNA.
DR EMBL; CP002684; ANM59741.1; -; Genomic_DNA.
DR EMBL; CP002684; ANM59742.1; -; Genomic_DNA.
DR PIR; C96659; C96659.
DR RefSeq; NP_001322078.1; NM_001334080.1.
DR RefSeq; NP_001322079.1; NM_001334079.1.
DR RefSeq; NP_176522.2; NM_105012.3.
DR AlphaFoldDB; Q9C8T7; -.
DR SMR; Q9C8T7; -.
DR PaxDb; Q9C8T7; -.
DR PRIDE; Q9C8T7; -.
DR ProteomicsDB; 250486; -.
DR EnsemblPlants; AT1G63330.1; AT1G63330.1; AT1G63330.
DR EnsemblPlants; AT1G63330.2; AT1G63330.2; AT1G63330.
DR EnsemblPlants; AT1G63330.3; AT1G63330.3; AT1G63330.
DR GeneID; 842639; -.
DR Gramene; AT1G63330.1; AT1G63330.1; AT1G63330.
DR Gramene; AT1G63330.2; AT1G63330.2; AT1G63330.
DR Gramene; AT1G63330.3; AT1G63330.3; AT1G63330.
DR KEGG; ath:AT1G63330; -.
DR Araport; AT1G63330; -.
DR TAIR; locus:2038483; AT1G63330.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_0_1; -.
DR InParanoid; Q9C8T7; -.
DR OMA; MNIAINC; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9C8T7; -.
DR PRO; PR:Q9C8T7; -.
DR Proteomes; UP000006548; Chromosome 1.
DR Genevisible; Q9C8T7; AT.
DR Gene3D; 1.25.40.10; -; 7.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 6.
DR TIGRFAMs; TIGR00756; PPR; 14.
DR PROSITE; PS51375; PPR; 15.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat.
FT CHAIN 1..559
FT /note="Pentatricopeptide repeat-containing protein
FT At1g63330"
FT /id="PRO_0000342842"
FT REPEAT 9..43
FT /note="PPR 1"
FT REPEAT 44..78
FT /note="PPR 2"
FT REPEAT 79..113
FT /note="PPR 3"
FT REPEAT 114..148
FT /note="PPR 4"
FT REPEAT 149..183
FT /note="PPR 5"
FT REPEAT 184..218
FT /note="PPR 6"
FT REPEAT 219..253
FT /note="PPR 7"
FT REPEAT 254..288
FT /note="PPR 8"
FT REPEAT 289..323
FT /note="PPR 9"
FT REPEAT 324..358
FT /note="PPR 10"
FT REPEAT 359..393
FT /note="PPR 11"
FT REPEAT 394..428
FT /note="PPR 12"
FT REPEAT 429..463
FT /note="PPR 13"
FT REPEAT 464..498
FT /note="PPR 14"
FT REPEAT 499..533
FT /note="PPR 15"
SQ SEQUENCE 559 AA; 62850 MW; 7A1A8B959D78F075 CRC64;
MVKSRPLPSI FEFNKLLSAI AKMKKFDLVI SLGEKMQRLG ISHNLYTYNI LINCFCRRSQ
ISLALALLGK MMKLGYEPSI VTLSSLLNGY CHGKRISDAV ALVDQMVEMG YRPDTITFTT
LIHGLFLHNK ASEAVALVDR MVQRGCQPNL VTYGVVVNGL CKRGDIDLAF NLLNKMEAAK
IEADVVIFNT IIDSLCKYRH VDDALNLFKE METKGIRPNV VTYSSLISCL CSYGRWSDAS
QLLSDMIEKK INPNLVTFNA LIDAFVKEGK FVEAEKLHDD MIKRSIDPDI FTYNSLINGF
CMHDRLDKAK QMFEFMVSKD CFPDLDTYNT LIKGFCKSKR VEDGTELFRE MSHRGLVGDT
VTYTTLIQGL FHDGDCDNAQ KVFKQMVSDG VPPDIMTYSI LLDGLCNNGK LEKALEVFDY
MQKSEIKLDI YIYTTMIEGM CKAGKVDDGW DLFCSLSLKG VKPNVVTYNT MISGLCSKRL
LQEAYALLKK MKEDGPLPDS GTYNTLIRAH LRDGDKAASA ELIREMRSCR FVGDASTIGL
VANMLHDGRL DKSFLDMLS
