PP106_ARATH
ID PP106_ARATH Reviewed; 512 AA.
AC P0C7R3; Q9SGV7;
DT 01-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-JUL-2008, sequence version 1.
DT 25-MAY-2022, entry version 82.
DE RecName: Full=Pentatricopeptide repeat-containing protein At1g64583, mitochondrial;
DE Flags: Precursor;
GN OrderedLocusNames=At1g64583; ORFNames=F1N19.15;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF19688.1; Type=Erroneous gene model prediction; Note=The predicted gene has been split into 2 genes: At1g64580 and At1g64583.; Evidence={ECO:0000305};
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AC009519; AAF19688.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE34256.1; -; Genomic_DNA.
DR PIR; C96669; C96669.
DR RefSeq; NP_001185309.1; NM_001198380.2.
DR AlphaFoldDB; P0C7R3; -.
DR SMR; P0C7R3; -.
DR PaxDb; P0C7R3; -.
DR PRIDE; P0C7R3; -.
DR EnsemblPlants; AT1G64583.1; AT1G64583.1; AT1G64583.
DR GeneID; 10723135; -.
DR Gramene; AT1G64583.1; AT1G64583.1; AT1G64583.
DR KEGG; ath:AT1G64583; -.
DR Araport; AT1G64583; -.
DR TAIR; locus:6530298167; AT1G64583.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_0_1; -.
DR OMA; THNADDA; -.
DR OrthoDB; 1344243at2759; -.
DR PRO; PR:P0C7R3; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; P0C7R3; baseline and differential.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR Gene3D; 1.25.40.10; -; 4.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 5.
DR SUPFAM; SSF48452; SSF48452; 1.
DR TIGRFAMs; TIGR00756; PPR; 11.
DR PROSITE; PS51375; PPR; 12.
PE 2: Evidence at transcript level;
KW Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT TRANSIT 1..34
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 35..512
FT /note="Pentatricopeptide repeat-containing protein
FT At1g64583, mitochondrial"
FT /id="PRO_0000342847"
FT REPEAT 70..104
FT /note="PPR 1"
FT REPEAT 105..139
FT /note="PPR 2"
FT REPEAT 140..174
FT /note="PPR 3"
FT REPEAT 175..209
FT /note="PPR 4"
FT REPEAT 210..244
FT /note="PPR 5"
FT REPEAT 245..279
FT /note="PPR 6"
FT REPEAT 280..314
FT /note="PPR 7"
FT REPEAT 315..349
FT /note="PPR 8"
FT REPEAT 350..384
FT /note="PPR 9"
FT REPEAT 385..415
FT /note="PPR 10"
FT REPEAT 420..454
FT /note="PPR 11"
FT REPEAT 455..489
FT /note="PPR 12"
SQ SEQUENCE 512 AA; 57889 MW; 9876AB813ACCBA86 CRC64;
MRRLIVTGIA TSTAKGFRRV VNPNLLGGGA AARAFSDYRE KLRTGFLHSI RFEDAFALFF
EMVHSQPLPS IVDFTRLLTA TANLRRYETV IYFSQKMELY GISHDLYSFT ILIHCFCRCS
RLSFALSVLG KMMKLGYEPS IVTFGSLLHG FCLVNRIGDA FSLVILMVKS GYEPNVVVYN
TLIDGLCKNG ELNIALELLN EMEKKGLGAD VVTYNTLLTG LCYSGRWSDA ARMLRDMMKR
SINPDVVTFT ALIDVFVKQG NLDEAQELYK EMIQSSVDPN NVTYNSIING LCMHGRLYDA
KKTFDLMASK GCFPNVVTYN TLISGFCKFR MVDEGMKLFQ RMSCEGFNAD IFTYNTLIHG
YCQVGKLRVA LDIFCWMVSR RVTPDIITHC ILLHGLCVNG EIESALVKFD DMRESEKYIG
IVAYNIMIHG LCKADKVEKA WELFCRLPVE GVKPDARTYT IMILGLCKNG PRREADELIR
RMKEEGIICQ MNAEDDHLEE HSSSNKEISL VS
