PP107_ARATH
ID PP107_ARATH Reviewed; 544 AA.
AC Q3ECH5;
DT 01-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 08-NOV-2005, sequence version 1.
DT 03-AUG-2022, entry version 96.
DE RecName: Full=Pentatricopeptide repeat-containing protein At1g66345, mitochondrial;
DE Flags: Precursor;
GN OrderedLocusNames=At1g66345; ORFNames=T27F4.19;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AC020665; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002684; AEE34498.1; -; Genomic_DNA.
DR RefSeq; NP_849849.1; NM_179518.1.
DR AlphaFoldDB; Q3ECH5; -.
DR SMR; Q3ECH5; -.
DR STRING; 3702.AT1G66345.1; -.
DR iPTMnet; Q3ECH5; -.
DR PaxDb; Q3ECH5; -.
DR PRIDE; Q3ECH5; -.
DR ProteomicsDB; 250575; -.
DR EnsemblPlants; AT1G66345.1; AT1G66345.1; AT1G66345.
DR GeneID; 842952; -.
DR Gramene; AT1G66345.1; AT1G66345.1; AT1G66345.
DR KEGG; ath:AT1G66345; -.
DR Araport; AT1G66345; -.
DR TAIR; locus:1005716687; AT1G66345.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_12_1; -.
DR InParanoid; Q3ECH5; -.
DR OMA; CLIYGMI; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q3ECH5; -.
DR PRO; PR:Q3ECH5; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q3ECH5; baseline and differential.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR GO; GO:0000373; P:Group II intron splicing; IMP:TAIR.
DR GO; GO:0032981; P:mitochondrial respiratory chain complex I assembly; IMP:TAIR.
DR GO; GO:0000963; P:mitochondrial RNA processing; IMP:TAIR.
DR Gene3D; 1.25.40.10; -; 3.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR033443; PPR_long.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 1.
DR Pfam; PF17177; PPR_long; 1.
DR TIGRFAMs; TIGR00756; PPR; 5.
DR PROSITE; PS51375; PPR; 10.
PE 3: Inferred from homology;
KW Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT TRANSIT 1..116
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 117..544
FT /note="Pentatricopeptide repeat-containing protein
FT At1g66345, mitochondrial"
FT /id="PRO_0000342848"
FT REPEAT 163..197
FT /note="PPR 1"
FT REPEAT 198..232
FT /note="PPR 2"
FT REPEAT 233..267
FT /note="PPR 3"
FT REPEAT 268..302
FT /note="PPR 4"
FT REPEAT 303..337
FT /note="PPR 5"
FT REPEAT 338..372
FT /note="PPR 6"
FT REPEAT 373..407
FT /note="PPR 7"
FT REPEAT 408..442
FT /note="PPR 8"
FT REPEAT 443..477
FT /note="PPR 9"
FT REPEAT 478..512
FT /note="PPR 10"
FT REPEAT 513..544
FT /note="PPR 11"
SQ SEQUENCE 544 AA; 62332 MW; 42857291CB0978F6 CRC64;
MASALRRLVE QQQWRYLVSQ STRSPKLIHG FFSFSSKTNP NPNKQQQILI DYISKSLQSN
DTWETLSTKF SSIDLSDSLI ETILLRFKNP ETAKQALSFF HWSSHTRNLR HGIKSYALTI
HILVKARLLI DARALIESSL LNSPPDSDLV DSLLDTYEIS SSTPLVFDLL VQCYAKIRYL
ELGFDVFKRL CDCGFTLSVI TLNTLIHYSS KSKIDDLVWR IYECAIDKRI YPNEITIRIM
IQVLCKEGRL KEVVDLLDRI CGKRCLPSVI VNTSLVFRVL EEMRIEESMS LLKRLLMKNM
VVDTIGYSIV VYAKAKEGDL VSARKVFDEM LQRGFSANSF VYTVFVRVCC EKGDVKEAER
LLSEMEESGV SPYDETFNCL IGGFARFGWE EKGLEYCEVM VTRGLMPSCS AFNEMVKSVS
KIENVNRANE ILTKSIDKGF VPDEHTYSHL IRGFIEGNDI DQALKLFYEM EYRKMSPGFE
VFRSLIVGLC TCGKVEAGEK YLKIMKKRLI EPNADIYDAL IKAFQKIGDK TNADRVYNEM
ISVR
