PP110_ARATH
ID PP110_ARATH Reviewed; 658 AA.
AC P0C7R4; Q9C982;
DT 01-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-JUL-2008, sequence version 1.
DT 25-MAY-2022, entry version 78.
DE RecName: Full=Pentatricopeptide repeat-containing protein At1g69290;
GN OrderedLocusNames=At1g69290; ORFNames=F23O10.12, F23O10.28;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAG52501.1; Type=Erroneous gene model prediction; Note=The predicted gene has been split into 2 genes: At1g69290 and At1g69295.; Evidence={ECO:0000305};
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AC018364; AAG52501.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE34906.1; -; Genomic_DNA.
DR PIR; A96717; A96717.
DR RefSeq; NP_177089.2; NM_105596.2.
DR AlphaFoldDB; P0C7R4; -.
DR SMR; P0C7R4; -.
DR PaxDb; P0C7R4; -.
DR PRIDE; P0C7R4; -.
DR ProteomicsDB; 250576; -.
DR EnsemblPlants; AT1G69290.1; AT1G69290.1; AT1G69290.
DR GeneID; 843260; -.
DR Gramene; AT1G69290.1; AT1G69290.1; AT1G69290.
DR KEGG; ath:AT1G69290; -.
DR Araport; AT1G69290; -.
DR TAIR; locus:2026454; AT1G69290.
DR eggNOG; ENOG502QSBB; Eukaryota.
DR HOGENOM; CLU_008969_1_1_1; -.
DR InParanoid; P0C7R4; -.
DR OMA; KCANTAA; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; P0C7R4; -.
DR PRO; PR:P0C7R4; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; P0C7R4; baseline and differential.
DR Gene3D; 1.25.40.10; -; 3.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 1.
DR Pfam; PF13812; PPR_3; 1.
DR TIGRFAMs; TIGR00756; PPR; 1.
DR PROSITE; PS51375; PPR; 9.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat.
FT CHAIN 1..658
FT /note="Pentatricopeptide repeat-containing protein
FT At1g69290"
FT /id="PRO_0000342851"
FT REPEAT 214..249
FT /note="PPR 1"
FT REPEAT 250..284
FT /note="PPR 2"
FT REPEAT 285..320
FT /note="PPR 3"
FT REPEAT 323..353
FT /note="PPR 4"
FT REPEAT 361..395
FT /note="PPR 5"
FT REPEAT 397..431
FT /note="PPR 6"
FT REPEAT 432..466
FT /note="PPR 7"
FT REPEAT 467..497
FT /note="PPR 8"
FT REPEAT 503..537
FT /note="PPR 9"
FT REPEAT 538..568
FT /note="PPR 10"
FT REPEAT 581..615
FT /note="PPR 11"
FT REGION 1..23
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 39..61
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 658 AA; 73890 MW; F1798DAEE8CA7B22 CRC64;
MFRKTLNSIS RRHFSSSSPE SPSLYSFLKP SLFSHKPITL SPSLSPPQNP KTLTPDQKSS
FESTLHDSLN AHYTDEAWKA FRSLTAASSL PEKRLINSLI THLSGVEGSG ESISHRLKRA
FASAAYVIEK DPILLEFETV RTLLESMKLA KAAGPALALV KCMFKNRYFV PFDLWGHLVI
DICRENGSLA PFLKVFKESC RISVDEKLEF MKPDLVASNA ALEACCRQME SLADAENVIE
SMAVLGVKPD ELSFGFLAYL YARKGLREKI SELENLMDGF GFASRRILYS NMISGYVKSG
DLDSVSDVIL HSLKEGGEES SFSVETYCEL VKGFIESKSV KSLAKVILEA QKLESSYVGV
DSSVGFGIIN ACVNLGFSDK AHSILEEMIA QGGGSVGIGV YVPILKAYCK EYRTAEATQL
VTEISSSGLQ LDVEISNALI EASMTNQDFI SAFTLFRDMR ENRVVDLKGS YLTIMTGLLE
NQRPELMAAF LDEVVEDPRV EVNSHDWNSI IHAFCKSGRL EDARRTFRRM VFLRYEPNNQ
TYLSLINGYV SGEKYFNVLL LWNEIKGKIS SVEAEKRSRL DHALVDAFLY ALVKGGFFDA
AMQVVEKSQE MKIFVDKWRY KQAFMETHKK LRLPKLRKRN YKKMESLVAF KNWAGLNT
