PP112_ARATH
ID PP112_ARATH Reviewed; 510 AA.
AC Q9C9A2;
DT 01-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 25-MAY-2022, entry version 105.
DE RecName: Full=Pentatricopeptide repeat-containing protein At1g71060, mitochondrial;
DE Flags: Precursor;
GN OrderedLocusNames=At1g71060; ORFNames=F23N20.5;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AC016972; AAG51696.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE35157.1; -; Genomic_DNA.
DR PIR; A96735; A96735.
DR RefSeq; NP_177262.1; NM_105775.1.
DR AlphaFoldDB; Q9C9A2; -.
DR SMR; Q9C9A2; -.
DR STRING; 3702.AT1G71060.1; -.
DR iPTMnet; Q9C9A2; -.
DR PaxDb; Q9C9A2; -.
DR PRIDE; Q9C9A2; -.
DR ProteomicsDB; 249060; -.
DR EnsemblPlants; AT1G71060.1; AT1G71060.1; AT1G71060.
DR GeneID; 843446; -.
DR Gramene; AT1G71060.1; AT1G71060.1; AT1G71060.
DR KEGG; ath:AT1G71060; -.
DR Araport; AT1G71060; -.
DR TAIR; locus:2026346; AT1G71060.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_20_1; -.
DR InParanoid; Q9C9A2; -.
DR OMA; DACKYFQ; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9C9A2; -.
DR PRO; PR:Q9C9A2; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9C9A2; baseline and differential.
DR Genevisible; Q9C9A2; AT.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR Gene3D; 1.25.40.10; -; 3.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 4.
DR TIGRFAMs; TIGR00756; PPR; 7.
DR PROSITE; PS51375; PPR; 10.
PE 2: Evidence at transcript level;
KW Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT TRANSIT 1..14
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 15..510
FT /note="Pentatricopeptide repeat-containing protein
FT At1g71060, mitochondrial"
FT /id="PRO_0000342853"
FT REPEAT 127..157
FT /note="PPR 1"
FT REPEAT 161..195
FT /note="PPR 2"
FT REPEAT 196..230
FT /note="PPR 3"
FT REPEAT 231..265
FT /note="PPR 4"
FT REPEAT 266..300
FT /note="PPR 5"
FT REPEAT 301..335
FT /note="PPR 6"
FT REPEAT 336..370
FT /note="PPR 7"
FT REPEAT 371..401
FT /note="PPR 8"
FT REPEAT 403..437
FT /note="PPR 9"
FT REPEAT 438..472
FT /note="PPR 10"
SQ SEQUENCE 510 AA; 58525 MW; 80465B7317189D63 CRC64;
MVFSRFFRVT GVNLSRRVYS RISSSSSPSL ESIPWIHKAS NFTLYGSFHA SSVETQVSAN
DASQDAERIC KILTKFTDSK VETLLNEASV KLSPALIEEV LKKLSNAGVL ALSVFKWAEN
QKGFKHTTSN YNALIESLGK IKQFKLIWSL VDDMKAKKLL SKETFALISR RYARARKVKE
AIGAFHKMEE FGFKMESSDF NRMLDTLSKS RNVGDAQKVF DKMKKKRFEP DIKSYTILLE
GWGQELNLLR VDEVNREMKD EGFEPDVVAY GIIINAHCKA KKYEEAIRFF NEMEQRNCKP
SPHIFCSLIN GLGSEKKLND ALEFFERSKS SGFPLEAPTY NALVGAYCWS QRMEDAYKTV
DEMRLKGVGP NARTYDIILH HLIRMQRSKE AYEVYQTMSC EPTVSTYEIM VRMFCNKERL
DMAIKIWDEM KGKGVLPGMH MFSSLITALC HENKLDEACE YFNEMLDVGI RPPGHMFSRL
KQTLLDEGRK DKVTDLVVKM DRLRKTQLVG
