PP117_ARATH
ID PP117_ARATH Reviewed; 568 AA.
AC Q9FX35;
DT 01-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-JUL-2008, sequence version 2.
DT 03-AUG-2022, entry version 110.
DE RecName: Full=Pentatricopeptide repeat-containing protein At1g73400, mitochondrial;
DE Flags: Precursor;
GN OrderedLocusNames=At1g73400; ORFNames=T9L24.39;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAG30989.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AC012396; AAG30989.1; ALT_INIT; Genomic_DNA.
DR EMBL; CP002684; AEE35457.1; -; Genomic_DNA.
DR PIR; F96760; F96760.
DR RefSeq; NP_177483.2; NM_106000.3.
DR AlphaFoldDB; Q9FX35; -.
DR SMR; Q9FX35; -.
DR STRING; 3702.AT1G73400.1; -.
DR PaxDb; Q9FX35; -.
DR PRIDE; Q9FX35; -.
DR ProteomicsDB; 249401; -.
DR EnsemblPlants; AT1G73400.1; AT1G73400.1; AT1G73400.
DR GeneID; 843675; -.
DR Gramene; AT1G73400.1; AT1G73400.1; AT1G73400.
DR KEGG; ath:AT1G73400; -.
DR Araport; AT1G73400; -.
DR TAIR; locus:2206915; AT1G73400.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_20_1; -.
DR InParanoid; Q9FX35; -.
DR OMA; QENYSHE; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9FX35; -.
DR PRO; PR:Q9FX35; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9FX35; baseline and differential.
DR Genevisible; Q9FX35; AT.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR Gene3D; 1.25.40.10; -; 4.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 2.
DR TIGRFAMs; TIGR00756; PPR; 7.
DR PROSITE; PS51375; PPR; 9.
PE 2: Evidence at transcript level;
KW Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT TRANSIT 1..55
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 56..568
FT /note="Pentatricopeptide repeat-containing protein
FT At1g73400, mitochondrial"
FT /id="PRO_0000342858"
FT REPEAT 233..263
FT /note="PPR 1"
FT REPEAT 267..301
FT /note="PPR 2"
FT REPEAT 302..336
FT /note="PPR 3"
FT REPEAT 340..374
FT /note="PPR 4"
FT REPEAT 375..409
FT /note="PPR 5"
FT REPEAT 410..444
FT /note="PPR 6"
FT REPEAT 445..479
FT /note="PPR 7"
FT REPEAT 480..514
FT /note="PPR 8"
SQ SEQUENCE 568 AA; 65679 MW; 0015A40326589198 CRC64;
MMRRLVSYFV RSRFSLHLST TPPQRSALFS HILSSHLDSI QINKKISSFS VHRFCSTTLL
NPELEITRIE KVSEDQSLVY CNENDIRTKG SNHAVGILHE AIMANLNAYD DMEKALDESS
VDLTTPVVCK ILQRLQYEEK TAFRFFTWAG HQEHYSHEPI AYNEMIDILS STKYKNKQFR
IVIDMLDYMK RNNKTVVLVD VLLEILRKYC ERYLTHVQKF AKRKRIRVKT QPEINAFNML
LDALCKCGLV KEGEALLRRM RHRVKPDANT FNVLFFGWCR VRDPKKAMKL LEEMIEAGHK
PENFTYCAAI DTFCQAGMVD EAADLFDFMI TKGSAVSAPT AKTFALMIVA LAKNDKAEEC
FELIGRMIST GCLPDVSTYK DVIEGMCMAE KVDEAYKFLD EMSNKGYPPD IVTYNCFLRV
LCENRKTDEA LKLYGRMVES RCAPSVQTYN MLISMFFEMD DPDGAFNTWT EMDKRDCVQD
VETYCAMING LFDCHRAKEA CFLLEEVVNK GLKLPYRVFD SFLMRLSEVG NLKAIHKVSE
HMKKFYNHSM ARRFALSEKR KSTKLRGK
