PP118_ARATH
ID PP118_ARATH Reviewed; 991 AA.
AC Q9C9U0;
DT 01-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 25-MAY-2022, entry version 110.
DE RecName: Full=Pentatricopeptide repeat-containing protein At1g73710;
GN OrderedLocusNames=At1g73710; ORFNames=F25P22.13;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AC012679; AAG52063.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE35500.1; -; Genomic_DNA.
DR PIR; C96764; C96764.
DR RefSeq; NP_177512.1; NM_106030.2.
DR AlphaFoldDB; Q9C9U0; -.
DR SMR; Q9C9U0; -.
DR PaxDb; Q9C9U0; -.
DR PRIDE; Q9C9U0; -.
DR ProteomicsDB; 249063; -.
DR EnsemblPlants; AT1G73710.1; AT1G73710.1; AT1G73710.
DR GeneID; 843706; -.
DR Gramene; AT1G73710.1; AT1G73710.1; AT1G73710.
DR KEGG; ath:AT1G73710; -.
DR Araport; AT1G73710; -.
DR TAIR; locus:2027744; AT1G73710.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_011648_0_0_1; -.
DR InParanoid; Q9C9U0; -.
DR OMA; LPVVMKM; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9C9U0; -.
DR PRO; PR:Q9C9U0; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9C9U0; baseline and differential.
DR Genevisible; Q9C9U0; AT.
DR Gene3D; 1.25.40.10; -; 6.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 5.
DR Pfam; PF13041; PPR_2; 4.
DR Pfam; PF13812; PPR_3; 1.
DR SUPFAM; SSF48452; SSF48452; 1.
DR TIGRFAMs; TIGR00756; PPR; 12.
DR PROSITE; PS51375; PPR; 19.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat.
FT CHAIN 1..991
FT /note="Pentatricopeptide repeat-containing protein
FT At1g73710"
FT /id="PRO_0000342859"
FT REPEAT 144..178
FT /note="PPR 1"
FT REPEAT 179..213
FT /note="PPR 2"
FT REPEAT 214..248
FT /note="PPR 3"
FT REPEAT 304..338
FT /note="PPR 4"
FT REPEAT 339..373
FT /note="PPR 5"
FT REPEAT 374..408
FT /note="PPR 6"
FT REPEAT 409..443
FT /note="PPR 7"
FT REPEAT 444..474
FT /note="PPR 8"
FT REPEAT 478..513
FT /note="PPR 9"
FT REPEAT 514..548
FT /note="PPR 10"
FT REPEAT 549..583
FT /note="PPR 11"
FT REPEAT 584..618
FT /note="PPR 12"
FT REPEAT 619..653
FT /note="PPR 13"
FT REPEAT 654..688
FT /note="PPR 14"
FT REPEAT 689..719
FT /note="PPR 15"
FT REPEAT 723..757
FT /note="PPR 16"
FT REPEAT 758..792
FT /note="PPR 17"
FT REPEAT 862..896
FT /note="PPR 18"
FT REPEAT 897..931
FT /note="PPR 19"
FT REGION 1..27
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 61..81
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 965..991
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 13..27
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 973..991
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 991 AA; 110657 MW; A2FB35EC73E25563 CRC64;
MLQPSPPHYS SSRDVRHHHH HHHHHHHLAL SSKARVFPLS LPCNFSSRVS FKLQLHCAAS
SSSSVSPPRC SKPNPSSRKR KYGGVIPSIL RSLDSSTDIE TTLASLCLNL SPKEQTVLLK
EQTRWERVLR VFRFFQSHQS YVPNVIHYNI VLRALGRAGK WDELRLCWIE MAHNGVLPTN
NTYGMLVDVY GKAGLVKEAL LWIKHMGQRM HFPDEVTMAT VVRVFKNSGE FDRADRFFKG
WCAGKVDLDL DSIDDFPKNG SAQSPVNLKQ FLSMELFKVG ARNPIEKSLH FASGSDSSPR
KPRLTSTFNT LIDLYGKAGR LNDAANLFSE MLKSGVPIDT VTFNTMIHTC GTHGHLSEAE
SLLKKMEEKG ISPDTKTYNI LLSLHADAGD IEAALEYYRK IRKVGLFPDT VTHRAVLHIL
CQRKMVAEVE AVIAEMDRNS IRIDEHSVPV IMQMYVNEGL VVQAKALFER FQLDCVLSST
TLAAVIDVYA EKGLWVEAET VFYGKRNMSG QRNDVLEYNV MIKAYGKAKL HEKALSLFKG
MKNQGTWPDE CTYNSLFQML AGVDLVDEAQ RILAEMLDSG CKPGCKTYAA MIASYVRLGL
LSDAVDLYEA MEKTGVKPNE VVYGSLINGF AESGMVEEAI QYFRMMEEHG VQSNHIVLTS
LIKAYSKVGC LEEARRVYDK MKDSEGGPDV AASNSMLSLC ADLGIVSEAE SIFNALREKG
TCDVISFATM MYLYKGMGML DEAIEVAEEM RESGLLSDCT SFNQVMACYA ADGQLSECCE
LFHEMLVERK LLLDWGTFKT LFTLLKKGGV PSEAVSQLQT AYNEAKPLAT PAITATLFSA
MGLYAYALES CQELTSGEIP REHFAYNAVI YTYSASGDID MALKAYMRMQ EKGLEPDIVT
QAYLVGIYGK AGMVEGVKRV HSRLTFGELE PSQSLFKAVR DAYVSANRQD LADVVKKEMS
IAFEAERECS SRSGEEEEDD EEENSEEDEA F
