PP120_ARATH
ID PP120_ARATH Reviewed; 763 AA.
AC Q9CA58;
DT 01-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 25-MAY-2022, entry version 105.
DE RecName: Full=Putative pentatricopeptide repeat-containing protein At1g74580;
GN OrderedLocusNames=At1g74580; ORFNames=F1M20.26;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AC011765; AAG52381.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE35612.1; -; Genomic_DNA.
DR EMBL; CP002684; ANM59824.1; -; Genomic_DNA.
DR EMBL; CP002684; ANM59825.1; -; Genomic_DNA.
DR PIR; H96774; H96774.
DR RefSeq; NP_001322154.1; NM_001334655.1.
DR RefSeq; NP_001322155.1; NM_001334656.1.
DR RefSeq; NP_177597.1; NM_106117.2.
DR AlphaFoldDB; Q9CA58; -.
DR SMR; Q9CA58; -.
DR PaxDb; Q9CA58; -.
DR PRIDE; Q9CA58; -.
DR ProteomicsDB; 249131; -.
DR EnsemblPlants; AT1G74580.1; AT1G74580.1; AT1G74580.
DR EnsemblPlants; AT1G74580.2; AT1G74580.2; AT1G74580.
DR EnsemblPlants; AT1G74580.3; AT1G74580.3; AT1G74580.
DR GeneID; 843798; -.
DR Gramene; AT1G74580.1; AT1G74580.1; AT1G74580.
DR Gramene; AT1G74580.2; AT1G74580.2; AT1G74580.
DR Gramene; AT1G74580.3; AT1G74580.3; AT1G74580.
DR KEGG; ath:AT1G74580; -.
DR Araport; AT1G74580; -.
DR TAIR; locus:2019085; AT1G74580.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_12_1; -.
DR InParanoid; Q9CA58; -.
DR OMA; WTYNLVI; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9CA58; -.
DR PRO; PR:Q9CA58; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9CA58; baseline and differential.
DR Genevisible; Q9CA58; AT.
DR Gene3D; 1.25.40.10; -; 8.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 7.
DR TIGRFAMs; TIGR00756; PPR; 16.
DR PROSITE; PS51375; PPR; 19.
PE 3: Inferred from homology;
KW Reference proteome; Repeat.
FT CHAIN 1..763
FT /note="Putative pentatricopeptide repeat-containing protein
FT At1g74580"
FT /id="PRO_0000342861"
FT REPEAT 39..69
FT /note="PPR 1"
FT REPEAT 75..109
FT /note="PPR 2"
FT REPEAT 110..144
FT /note="PPR 3"
FT REPEAT 145..179
FT /note="PPR 4"
FT REPEAT 180..214
FT /note="PPR 5"
FT REPEAT 215..249
FT /note="PPR 6"
FT REPEAT 250..284
FT /note="PPR 7"
FT REPEAT 285..319
FT /note="PPR 8"
FT REPEAT 320..354
FT /note="PPR 9"
FT REPEAT 355..389
FT /note="PPR 10"
FT REPEAT 390..424
FT /note="PPR 11"
FT REPEAT 425..459
FT /note="PPR 12"
FT REPEAT 460..494
FT /note="PPR 13"
FT REPEAT 495..529
FT /note="PPR 14"
FT REPEAT 530..564
FT /note="PPR 15"
FT REPEAT 565..595
FT /note="PPR 16"
FT REPEAT 601..635
FT /note="PPR 17"
FT REPEAT 636..670
FT /note="PPR 18"
FT REPEAT 671..705
FT /note="PPR 19"
SQ SEQUENCE 763 AA; 85770 MW; C7F27EAC5290A16E CRC64;
MGPPLLPKHV TAVIKCQKDP MKALEMFNSM RKEVGFKHTL STYRSVIEKL GYYGKFEAME
EVLVDMRENV GNHMLEGVYV GAMKNYGRKG KVQEAVNVFE RMDFYDCEPT VFSYNAIMSV
LVDSGYFDQA HKVYMRMRDR GITPDVYSFT IRMKSFCKTS RPHAALRLLN NMSSQGCEMN
VVAYCTVVGG FYEENFKAEG YELFGKMLAS GVSLCLSTFN KLLRVLCKKG DVKECEKLLD
KVIKRGVLPN LFTYNLFIQG LCQRGELDGA VRMVGCLIEQ GPKPDVITYN NLIYGLCKNS
KFQEAEVYLG KMVNEGLEPD SYTYNTLIAG YCKGGMVQLA ERIVGDAVFN GFVPDQFTYR
SLIDGLCHEG ETNRALALFN EALGKGIKPN VILYNTLIKG LSNQGMILEA AQLANEMSEK
GLIPEVQTFN ILVNGLCKMG CVSDADGLVK VMISKGYFPD IFTFNILIHG YSTQLKMENA
LEILDVMLDN GVDPDVYTYN SLLNGLCKTS KFEDVMETYK TMVEKGCAPN LFTFNILLES
LCRYRKLDEA LGLLEEMKNK SVNPDAVTFG TLIDGFCKNG DLDGAYTLFR KMEEAYKVSS
STPTYNIIIH AFTEKLNVTM AEKLFQEMVD RCLGPDGYTY RLMVDGFCKT GNVNLGYKFL
LEMMENGFIP SLTTLGRVIN CLCVEDRVYE AAGIIHRMVQ KGLVPEAVNT ICDVDKKEVA
APKLVLEDLL KKSCITYYAY ELLFDGLRDK RLRKKKGFTV VAI
