PP133_ARATH
ID PP133_ARATH Reviewed; 780 AA.
AC Q9SAJ5;
DT 01-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 118.
DE RecName: Full=Pentatricopeptide repeat-containing protein At1g79540;
GN OrderedLocusNames=At1g79540; ORFNames=T8K14.4;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AC007202; AAD30222.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE36261.1; -; Genomic_DNA.
DR PIR; G96826; G96826.
DR RefSeq; NP_178072.1; NM_106602.3.
DR AlphaFoldDB; Q9SAJ5; -.
DR SMR; Q9SAJ5; -.
DR PaxDb; Q9SAJ5; -.
DR PRIDE; Q9SAJ5; -.
DR ProteomicsDB; 249409; -.
DR EnsemblPlants; AT1G79540.1; AT1G79540.1; AT1G79540.
DR GeneID; 844292; -.
DR Gramene; AT1G79540.1; AT1G79540.1; AT1G79540.
DR KEGG; ath:AT1G79540; -.
DR Araport; AT1G79540; -.
DR TAIR; locus:2206420; AT1G79540.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_2_1; -.
DR InParanoid; Q9SAJ5; -.
DR OMA; IWAAKRK; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9SAJ5; -.
DR PRO; PR:Q9SAJ5; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9SAJ5; baseline and differential.
DR Genevisible; Q9SAJ5; AT.
DR GO; GO:0003729; F:mRNA binding; IDA:TAIR.
DR Gene3D; 1.25.40.10; -; 6.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 3.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 4.
DR Pfam; PF13812; PPR_3; 1.
DR TIGRFAMs; TIGR00756; PPR; 13.
DR PROSITE; PS51375; PPR; 16.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat.
FT CHAIN 1..780
FT /note="Pentatricopeptide repeat-containing protein
FT At1g79540"
FT /id="PRO_0000342874"
FT REPEAT 91..125
FT /note="PPR 1"
FT REPEAT 126..160
FT /note="PPR 2"
FT REPEAT 161..196
FT /note="PPR 3"
FT REPEAT 197..231
FT /note="PPR 4"
FT REPEAT 232..266
FT /note="PPR 5"
FT REPEAT 267..301
FT /note="PPR 6"
FT REPEAT 302..336
FT /note="PPR 7"
FT REPEAT 337..371
FT /note="PPR 8"
FT REPEAT 372..406
FT /note="PPR 9"
FT REPEAT 407..441
FT /note="PPR 10"
FT REPEAT 442..476
FT /note="PPR 11"
FT REPEAT 481..515
FT /note="PPR 12"
FT REPEAT 516..550
FT /note="PPR 13"
FT REPEAT 551..585
FT /note="PPR 14"
FT REPEAT 653..687
FT /note="PPR 15"
FT REPEAT 688..722
FT /note="PPR 16"
FT REPEAT 723..758
FT /note="PPR 17"
SQ SEQUENCE 780 AA; 88851 MW; 604B8E9FBA88BFA9 CRC64;
MKPQMFFRSV IQFYSKPSWM QRSYSSGNAE FNISGEVISI LAKKKPIEPA LEPLVPFLSK
NIITSVIKDE VNRQLGFRFF IWASRRERLR SRESFGLVID MLSEDNGCDL YWQTLEELKS
GGVSVDSYCF CVLISAYAKM GMAEKAVESF GRMKEFDCRP DVFTYNVILR VMMREEVFFM
LAFAVYNEML KCNCSPNLYT FGILMDGLYK KGRTSDAQKM FDDMTGRGIS PNRVTYTILI
SGLCQRGSAD DARKLFYEMQ TSGNYPDSVA HNALLDGFCK LGRMVEAFEL LRLFEKDGFV
LGLRGYSSLI DGLFRARRYT QAFELYANML KKNIKPDIIL YTILIQGLSK AGKIEDALKL
LSSMPSKGIS PDTYCYNAVI KALCGRGLLE EGRSLQLEMS ETESFPDACT HTILICSMCR
NGLVREAEEI FTEIEKSGCS PSVATFNALI DGLCKSGELK EARLLLHKME VGRPASLFLR
LSHSGNRSFD TMVESGSILK AYRDLAHFAD TGSSPDIVSY NVLINGFCRA GDIDGALKLL
NVLQLKGLSP DSVTYNTLIN GLHRVGREEE AFKLFYAKDD FRHSPAVYRS LMTWSCRKRK
VLVAFNLWMK YLKKISCLDD ETANEIEQCF KEGETERALR RLIELDTRKD ELTLGPYTIW
LIGLCQSGRF HEALMVFSVL REKKILVTPP SCVKLIHGLC KREQLDAAIE VFLYTLDNNF
KLMPRVCNYL LSSLLESTEK MEIVSQLTNR MERAGYNVDS MLRFEILKYH RHRKQVLIDL
