PP137_ARATH
ID PP137_ARATH Reviewed; 540 AA.
AC Q9SAH2;
DT 01-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 111.
DE RecName: Full=Pentatricopeptide repeat-containing protein At1g80880, mitochondrial;
DE Flags: Precursor;
GN OrderedLocusNames=At1g80880; ORFNames=F23A5.24;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=17147637; DOI=10.1111/j.1467-7652.2006.00183.x;
RA Underwood B.A., Vanderhaeghen R., Whitford R., Town C.D., Hilson P.;
RT "Simultaneous high-throughput recombinational cloning of open reading
RT frames in closed and open configurations.";
RL Plant Biotechnol. J. 4:317-324(2006).
RN [4]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AC011713; AAF14676.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE36463.1; -; Genomic_DNA.
DR EMBL; CP002684; ANM60753.1; -; Genomic_DNA.
DR EMBL; CP002684; ANM60754.1; -; Genomic_DNA.
DR EMBL; DQ446448; ABE65789.1; -; mRNA.
DR PIR; F96841; F96841.
DR RefSeq; NP_001319433.1; NM_001335018.1.
DR RefSeq; NP_001323017.1; NM_001335019.1.
DR RefSeq; NP_178203.1; NM_106736.2.
DR AlphaFoldDB; Q9SAH2; -.
DR SMR; Q9SAH2; -.
DR STRING; 3702.AT1G80880.1; -.
DR PaxDb; Q9SAH2; -.
DR PRIDE; Q9SAH2; -.
DR ProteomicsDB; 249412; -.
DR EnsemblPlants; AT1G80880.1; AT1G80880.1; AT1G80880.
DR EnsemblPlants; AT1G80880.2; AT1G80880.2; AT1G80880.
DR EnsemblPlants; AT1G80880.3; AT1G80880.3; AT1G80880.
DR GeneID; 844428; -.
DR Gramene; AT1G80880.1; AT1G80880.1; AT1G80880.
DR Gramene; AT1G80880.2; AT1G80880.2; AT1G80880.
DR Gramene; AT1G80880.3; AT1G80880.3; AT1G80880.
DR KEGG; ath:AT1G80880; -.
DR Araport; AT1G80880; -.
DR TAIR; locus:2025747; AT1G80880.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_20_1; -.
DR InParanoid; Q9SAH2; -.
DR OMA; YNSMIVP; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9SAH2; -.
DR PRO; PR:Q9SAH2; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9SAH2; baseline and differential.
DR Genevisible; Q9SAH2; AT.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR Gene3D; 1.25.40.10; -; 3.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR033443; PPR_long.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF17177; PPR_long; 1.
DR TIGRFAMs; TIGR00756; PPR; 4.
DR PROSITE; PS51375; PPR; 9.
PE 2: Evidence at transcript level;
KW Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT TRANSIT 1..87
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 88..540
FT /note="Pentatricopeptide repeat-containing protein
FT At1g80880, mitochondrial"
FT /id="PRO_0000342878"
FT REPEAT 154..184
FT /note="PPR 1"
FT REPEAT 188..222
FT /note="PPR 2"
FT REPEAT 223..253
FT /note="PPR 3"
FT REPEAT 257..292
FT /note="PPR 4"
FT REPEAT 293..327
FT /note="PPR 5"
FT REPEAT 328..362
FT /note="PPR 6"
FT REPEAT 363..397
FT /note="PPR 7"
FT REPEAT 402..428
FT /note="PPR 8"
FT REPEAT 429..463
FT /note="PPR 9"
FT REPEAT 464..498
FT /note="PPR 10"
FT REGION 514..540
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 540 AA; 61708 MW; 97146830B2B30A37 CRC64;
MAAIVAIGRK LARTPQWRIV QHQSLLRRAV STSFSSSVSQ NHSFSSAFHR AGHVHSQVLS
YLPHFASSNR FSTKTISETF DINLTALAPL EKGLIDLIRQ VSELESEADA MASLEDSSFD
LNHDSFYSLI WELRDEWRLA FLAFKWGEKR GCDDQKSCDL MIWVLGNHQK FNIAWCLIRD
MFNVSKDTRK AMFLMMDRYA AANDTSQAIR TFDIMDKFKH TPYDEAFQGL LCALCRHGHI
EKAEEFMLAS KKLFPVDVEG FNVILNGWCN IWTDVTEAKR IWREMGNYCI TPNKDSYSHM
ISCFSKVGNL FDSLRLYDEM KKRGLAPGIE VYNSLVYVLT REDCFDEAMK LMKKLNEEGL
KPDSVTYNSM IRPLCEAGKL DVARNVLATM ISENLSPTVD TFHAFLEAVN FEKTLEVLGQ
MKISDLGPTE ETFLLILGKL FKGKQPENAL KIWAEMDRFE IVANPALYLA TIQGLLSCGW
LEKAREIYSE MKSKGFVGNP MLQKLLEEQK VKGVRKSKRM NLQKVGSQEG YKGQRSVDRK
