PP138_ARATH
ID PP138_ARATH Reviewed; 182 AA.
AC Q9ZU31; F4INA1;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-1999, sequence version 1.
DT 03-AUG-2022, entry version 92.
DE RecName: Full=Pentatricopeptide repeat-containing protein At2g01360;
GN OrderedLocusNames=At2g01360; ORFNames=F10A8.24;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 23-182.
RC STRAIN=cv. Columbia;
RG Center for eukaryotic structural genomics (CESG);
RL Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AC006200; AAD14536.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC05443.2; -; Genomic_DNA.
DR EMBL; BT015631; -; NOT_ANNOTATED_CDS; mRNA.
DR PIR; G84423; G84423.
DR RefSeq; NP_178245.3; NM_126197.3.
DR AlphaFoldDB; Q9ZU31; -.
DR SMR; Q9ZU31; -.
DR PaxDb; Q9ZU31; -.
DR PRIDE; Q9ZU31; -.
DR EnsemblPlants; AT2G01360.1; AT2G01360.1; AT2G01360.
DR GeneID; 814664; -.
DR Gramene; AT2G01360.1; AT2G01360.1; AT2G01360.
DR KEGG; ath:AT2G01360; -.
DR Araport; AT2G01360; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_1671732_0_0_1; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9ZU31; -.
DR PRO; PR:Q9ZU31; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q9ZU31; baseline and differential.
DR Genevisible; Q9ZU31; AT.
DR Gene3D; 1.25.40.10; -; 1.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF13041; PPR_2; 1.
DR TIGRFAMs; TIGR00756; PPR; 1.
DR PROSITE; PS51375; PPR; 2.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat.
FT CHAIN 1..182
FT /note="Pentatricopeptide repeat-containing protein
FT At2g01360"
FT /id="PRO_0000355998"
FT REPEAT 30..64
FT /note="PPR 1"
FT REPEAT 65..95
FT /note="PPR 2"
FT REPEAT 98..132
FT /note="PPR 3"
SQ SEQUENCE 182 AA; 20335 MW; A6AA30883E9095C3 CRC64;
MTTNSWHSIL VIYLASLALD WSLEMGIHLE KSAYLALAGN FLRSNELSKV IDVVKEMVKS
QHSLGVYHGA MLIHMLGFGR RPSLAAEALD LLPDDQKGLS AYTALMDVYI SAGSPEKAMK
ILGEMREREI MPSLGTYDVL LSGLEKTSDF QRETSSLRKE QKSLVASTRF REIVHVEDKI
CM