PP150_ARATH
ID PP150_ARATH Reviewed; 509 AA.
AC Q0WP85;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 05-SEP-2006, sequence version 1.
DT 03-AUG-2022, entry version 75.
DE RecName: Full=Pentatricopeptide repeat-containing protein At2g13420, mitochondrial;
DE Flags: Precursor;
GN OrderedLocusNames=At2g13420; ORFNames=T26C18.1;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AC007294; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002685; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AK229194; BAF01064.1; -; mRNA.
DR AlphaFoldDB; Q0WP85; -.
DR SMR; Q0WP85; -.
DR PeptideAtlas; Q0WP85; -.
DR PRIDE; Q0WP85; -.
DR Araport; AT2G13420; -.
DR InParanoid; Q0WP85; -.
DR PRO; PR:Q0WP85; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q0WP85; baseline and differential.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR Gene3D; 1.25.40.10; -; 4.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF13041; PPR_2; 4.
DR TIGRFAMs; TIGR00756; PPR; 4.
DR PROSITE; PS51375; PPR; 9.
PE 2: Evidence at transcript level;
KW Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT TRANSIT 1..19
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 20..509
FT /note="Pentatricopeptide repeat-containing protein
FT At2g13420, mitochondrial"
FT /id="PRO_0000356010"
FT REPEAT 172..202
FT /note="PPR 1"
FT REPEAT 206..240
FT /note="PPR 2"
FT REPEAT 241..285
FT /note="PPR 3"
FT REPEAT 286..320
FT /note="PPR 4"
FT REPEAT 321..355
FT /note="PPR 5"
FT REPEAT 356..390
FT /note="PPR 6"
FT REPEAT 391..425
FT /note="PPR 7"
FT REPEAT 426..460
FT /note="PPR 8"
SQ SEQUENCE 509 AA; 58649 MW; 3A55BC73B11DBD67 CRC64;
MLLLKQISPP FHLHQLRRRI STIISAGFTL NLPKLEPSSD AELISQMLIT NHNPFHFMES
SLQLNGISLT PNLIHQTLLR LRHNSKIALS FFQYLRSLPS PSTTPTSFNL IIDILGRVRQ
FDVVRQLIVE MDQTSPETFL ILVKRLIAAG LTRQAVRAFD DAPCFLENRR FRLVEFGFLL
DTLCKYGYTK MAVGVFNERK EEFGSDEKVY TILIAGWCKL RRIDMAEKFL VEMIESGIEP
NVVTYNVLLN GICRTASLHP EERFERNVRN AEKVFDEMRQ RGIEPDVTSF SIVLHMYSRA
HKAELTLDKM KLMKAKGISP TIETYTSVVK CLCSCGRLEE AEELLETMVE SGISPSSATY
NCFFKEYKGR KDANGAMNLY RKMKNGLCKP STQTYNVLLG TFINLGKMET VKEIWDDLKA
SETGPDLDSY TSLVHGLCSK EKWKEACGYF VEMIERGFLP QKLTFETLYK GLIQSNKMRT
WRRLKKKLDE ESITFGSEFQ RYPFEPYKR