PP151_ARATH
ID PP151_ARATH Reviewed; 697 AA.
AC Q9SIT7;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 25-MAY-2022, entry version 110.
DE RecName: Full=Pentatricopeptide repeat-containing protein At2g13600;
GN Name=PCMP-E76; OrderedLocusNames=At2g13600; ORFNames=T10F5.14;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-E subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AC007063; AAD22682.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC06244.1; -; Genomic_DNA.
DR PIR; H84508; H84508.
DR RefSeq; NP_178983.1; NM_126939.2.
DR AlphaFoldDB; Q9SIT7; -.
DR SMR; Q9SIT7; -.
DR STRING; 3702.AT2G13600.1; -.
DR PaxDb; Q9SIT7; -.
DR PRIDE; Q9SIT7; -.
DR ProteomicsDB; 249135; -.
DR EnsemblPlants; AT2G13600.1; AT2G13600.1; AT2G13600.
DR GeneID; 815845; -.
DR Gramene; AT2G13600.1; AT2G13600.1; AT2G13600.
DR KEGG; ath:AT2G13600; -.
DR Araport; AT2G13600; -.
DR TAIR; locus:2054131; AT2G13600.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_37_8_1; -.
DR InParanoid; Q9SIT7; -.
DR OMA; VFMVKDR; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9SIT7; -.
DR PRO; PR:Q9SIT7; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q9SIT7; baseline and differential.
DR Genevisible; Q9SIT7; AT.
DR GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR GO; GO:0005739; C:mitochondrion; IDA:TAIR.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0080156; P:mitochondrial mRNA modification; IMP:TAIR.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR GO; GO:0010182; P:sugar mediated signaling pathway; IMP:TAIR.
DR Gene3D; 1.25.40.10; -; 5.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 5.
DR Pfam; PF13041; PPR_2; 4.
DR TIGRFAMs; TIGR00756; PPR; 8.
DR PROSITE; PS51375; PPR; 15.
PE 3: Inferred from homology;
KW Reference proteome; Repeat.
FT CHAIN 1..697
FT /note="Pentatricopeptide repeat-containing protein
FT At2g13600"
FT /id="PRO_0000356011"
FT REPEAT 18..53
FT /note="PPR 1"
FT REPEAT 54..84
FT /note="PPR 2"
FT REPEAT 85..115
FT /note="PPR 3"
FT REPEAT 116..150
FT /note="PPR 4"
FT REPEAT 151..185
FT /note="PPR 5"
FT REPEAT 186..216
FT /note="PPR 6"
FT REPEAT 217..251
FT /note="PPR 7"
FT REPEAT 252..282
FT /note="PPR 8"
FT REPEAT 288..322
FT /note="PPR 9"
FT REPEAT 324..349
FT /note="PPR 10"
FT REPEAT 350..384
FT /note="PPR 11"
FT REPEAT 385..419
FT /note="PPR 12"
FT REPEAT 426..456
FT /note="PPR 13"
FT REPEAT 457..491
FT /note="PPR 14"
FT REPEAT 492..527
FT /note="PPR 15"
FT REPEAT 528..558
FT /note="PPR 16"
FT REGION 563..638
FT /note="Type E motif"
FT REGION 639..669
FT /note="Type E(+) motif"
SQ SEQUENCE 697 AA; 78091 MW; 541BE4182F6EC52E CRC64;
MATKSFLKLA ADLSSFTDSS PFAKLLDSCI KSKLSAIYVR YVHASVIKSG FSNEIFIQNR
LIDAYSKCGS LEDGRQVFDK MPQRNIYTWN SVVTGLTKLG FLDEADSLFR SMPERDQCTW
NSMVSGFAQH DRCEEALCYF AMMHKEGFVL NEYSFASVLS ACSGLNDMNK GVQVHSLIAK
SPFLSDVYIG SALVDMYSKC GNVNDAQRVF DEMGDRNVVS WNSLITCFEQ NGPAVEALDV
FQMMLESRVE PDEVTLASVI SACASLSAIK VGQEVHGRVV KNDKLRNDII LSNAFVDMYA
KCSRIKEARF IFDSMPIRNV IAETSMISGY AMAASTKAAR LMFTKMAERN VVSWNALIAG
YTQNGENEEA LSLFCLLKRE SVCPTHYSFA NILKACADLA ELHLGMQAHV HVLKHGFKFQ
SGEEDDIFVG NSLIDMYVKC GCVEEGYLVF RKMMERDCVS WNAMIIGFAQ NGYGNEALEL
FREMLESGEK PDHITMIGVL SACGHAGFVE EGRHYFSSMT RDFGVAPLRD HYTCMVDLLG
RAGFLEEAKS MIEEMPMQPD SVIWGSLLAA CKVHRNITLG KYVAEKLLEV EPSNSGPYVL
LSNMYAELGK WEDVMNVRKS MRKEGVTKQP GCSWIKIQGH DHVFMVKDKS HPRKKQIHSL
LDILIAEMRP EQDHTEIGSL SSEEMDYSSN LLWDNAM
