PP158_ARATH
ID PP158_ARATH Reviewed; 874 AA.
AC Q0WPZ6; Q7XJT3;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 05-SEP-2006, sequence version 1.
DT 03-AUG-2022, entry version 91.
DE RecName: Full=Pentatricopeptide repeat-containing protein At2g17140;
GN OrderedLocusNames=At2g17140; ORFNames=F6P23.26;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CP002685; AEC06590.1; -; Genomic_DNA.
DR EMBL; CP002685; ANM63317.1; -; Genomic_DNA.
DR EMBL; AK228914; BAF00803.1; -; mRNA.
DR PIR; E84548; E84548.
DR RefSeq; NP_001325411.1; NM_001335538.1.
DR RefSeq; NP_179305.2; NM_127268.4.
DR AlphaFoldDB; Q0WPZ6; -.
DR SMR; Q0WPZ6; -.
DR PaxDb; Q0WPZ6; -.
DR PRIDE; Q0WPZ6; -.
DR ProteomicsDB; 249423; -.
DR EnsemblPlants; AT2G17140.1; AT2G17140.1; AT2G17140.
DR EnsemblPlants; AT2G17140.2; AT2G17140.2; AT2G17140.
DR GeneID; 816219; -.
DR Gramene; AT2G17140.1; AT2G17140.1; AT2G17140.
DR Gramene; AT2G17140.2; AT2G17140.2; AT2G17140.
DR KEGG; ath:AT2G17140; -.
DR Araport; AT2G17140; -.
DR TAIR; locus:2827701; AT2G17140.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_10_1; -.
DR InParanoid; Q0WPZ6; -.
DR OMA; WGQRGNV; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q0WPZ6; -.
DR PRO; PR:Q0WPZ6; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q0WPZ6; baseline and differential.
DR Genevisible; Q0WPZ6; AT.
DR Gene3D; 1.25.40.10; -; 7.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF12854; PPR_1; 3.
DR Pfam; PF13041; PPR_2; 6.
DR TIGRFAMs; TIGR00756; PPR; 14.
DR PROSITE; PS51375; PPR; 19.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat.
FT CHAIN 1..874
FT /note="Pentatricopeptide repeat-containing protein
FT At2g17140"
FT /id="PRO_0000356017"
FT REPEAT 111..145
FT /note="PPR 1"
FT REPEAT 146..180
FT /note="PPR 2"
FT REPEAT 181..215
FT /note="PPR 3"
FT REPEAT 216..250
FT /note="PPR 4"
FT REPEAT 251..285
FT /note="PPR 5"
FT REPEAT 290..320
FT /note="PPR 6"
FT REPEAT 325..359
FT /note="PPR 7"
FT REPEAT 360..394
FT /note="PPR 8"
FT REPEAT 395..429
FT /note="PPR 9"
FT REPEAT 430..464
FT /note="PPR 10"
FT REPEAT 465..499
FT /note="PPR 11"
FT REPEAT 523..557
FT /note="PPR 12"
FT REPEAT 558..592
FT /note="PPR 13"
FT REPEAT 593..627
FT /note="PPR 14"
FT REPEAT 628..662
FT /note="PPR 15"
FT REPEAT 663..693
FT /note="PPR 16"
FT REPEAT 697..731
FT /note="PPR 17"
FT REPEAT 732..766
FT /note="PPR 18"
FT REPEAT 767..797
FT /note="PPR 19"
SQ SEQUENCE 874 AA; 97746 MW; EDAFDFC772136698 CRC64;
MEQSLVKALL KNTNNPRLAW RIFKRIFSSP SEESHGISLD ATPTIARILV RAKMHEEIQE
LHNLILSSSI QKTKLSSLLS VVSIFAKSNH IDKAFPQFQL VRSRFPENKP SVYLYNLLLE
SCIKERRVEF VSWLYKDMVL CGIAPQTYTF NLLIRALCDS SCVDAARELF DEMPEKGCKP
NEFTFGILVR GYCKAGLTDK GLELLNAMES FGVLPNKVIY NTIVSSFCRE GRNDDSEKMV
EKMREEGLVP DIVTFNSRIS ALCKEGKVLD ASRIFSDMEL DEYLGLPRPN SITYNLMLKG
FCKVGLLEDA KTLFESIREN DDLASLQSYN IWLQGLVRHG KFIEAETVLK QMTDKGIGPS
IYSYNILMDG LCKLGMLSDA KTIVGLMKRN GVCPDAVTYG CLLHGYCSVG KVDAAKSLLQ
EMMRNNCLPN AYTCNILLHS LWKMGRISEA EELLRKMNEK GYGLDTVTCN IIVDGLCGSG
ELDKAIEIVK GMRVHGSAAL GNLGNSYIGL VDDSLIENNC LPDLITYSTL LNGLCKAGRF
AEAKNLFAEM MGEKLQPDSV AYNIFIHHFC KQGKISSAFR VLKDMEKKGC HKSLETYNSL
ILGLGIKNQI FEIHGLMDEM KEKGISPNIC TYNTAIQYLC EGEKVEDATN LLDEMMQKNI
APNVFSFKYL IEAFCKVPDF DMAQEVFETA VSICGQKEGL YSLMFNELLA AGQLLKATEL
LEAVLDRGFE LGTFLYKDLV ESLCKKDELE VASGILHKMI DRGYGFDPAA LMPVIDGLGK
MGNKKEANSF ADKMMEMASV GEVANKVDPN ARDIHQKKHN KNGGNNWQNI LHRDDGSGIA
LRSLSRVKKG WGQGDISSFQ PPRVDYLDYW EDDG
