PP171_ARATH
ID PP171_ARATH Reviewed; 799 AA.
AC O81028;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1998, sequence version 1.
DT 25-MAY-2022, entry version 118.
DE RecName: Full=Pentatricopeptide repeat-containing protein At2g26790, mitochondrial;
DE Flags: Precursor;
GN OrderedLocusNames=At2g26790; ORFNames=F12C20.17;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AC005168; AAC32245.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC07887.1; -; Genomic_DNA.
DR EMBL; CP002685; ANM62342.1; -; Genomic_DNA.
DR PIR; T02656; T02656.
DR RefSeq; NP_001318293.1; NM_001336084.1.
DR RefSeq; NP_180247.1; NM_128236.2.
DR AlphaFoldDB; O81028; -.
DR SMR; O81028; -.
DR STRING; 3702.AT2G26790.1; -.
DR PaxDb; O81028; -.
DR PRIDE; O81028; -.
DR EnsemblPlants; AT2G26790.1; AT2G26790.1; AT2G26790.
DR EnsemblPlants; AT2G26790.2; AT2G26790.2; AT2G26790.
DR GeneID; 817220; -.
DR Gramene; AT2G26790.1; AT2G26790.1; AT2G26790.
DR Gramene; AT2G26790.2; AT2G26790.2; AT2G26790.
DR KEGG; ath:AT2G26790; -.
DR Araport; AT2G26790; -.
DR TAIR; locus:2039558; AT2G26790.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_9_1; -.
DR InParanoid; O81028; -.
DR OMA; EMAFAFI; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; O81028; -.
DR PRO; PR:O81028; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; O81028; baseline and differential.
DR Genevisible; O81028; AT.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR Gene3D; 1.25.40.10; -; 6.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 9.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 3.
DR TIGRFAMs; TIGR00756; PPR; 7.
DR PROSITE; PS51375; PPR; 17.
PE 3: Inferred from homology;
KW Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT TRANSIT 1..27
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 28..799
FT /note="Pentatricopeptide repeat-containing protein
FT At2g26790, mitochondrial"
FT /id="PRO_0000356030"
FT REPEAT 145..179
FT /note="PPR 1"
FT REPEAT 180..214
FT /note="PPR 2"
FT REPEAT 215..250
FT /note="PPR 3"
FT REPEAT 251..278
FT /note="PPR 4"
FT REPEAT 282..316
FT /note="PPR 5"
FT REPEAT 317..351
FT /note="PPR 6"
FT REPEAT 352..386
FT /note="PPR 7"
FT REPEAT 387..421
FT /note="PPR 8"
FT REPEAT 422..456
FT /note="PPR 9"
FT REPEAT 457..491
FT /note="PPR 10"
FT REPEAT 492..522
FT /note="PPR 11"
FT REPEAT 523..553
FT /note="PPR 12"
FT REPEAT 555..589
FT /note="PPR 13"
FT REPEAT 590..624
FT /note="PPR 14"
FT REPEAT 625..659
FT /note="PPR 15"
FT REPEAT 660..695
FT /note="PPR 16"
FT REPEAT 708..742
FT /note="PPR 17"
FT REPEAT 743..777
FT /note="PPR 18"
SQ SEQUENCE 799 AA; 90360 MW; 7DC28FA311EBB7D6 CRC64;
MRFSPTFFLL SQLRLTRRRA ATSSRFYAVS ALNNPNNLSD SEQQQVNHLN LSKLTQHGLQ
RLLNSTRDDP NLALSFLRQL KEHGVSPNVN AYATLVRILT TWGLDIKLDS VLVELIKNEE
RGFTVMDLIE VIGEQAEEKK RSFVLIRVSG ALVKAYVSLG MFDEATDVLF QSKRLDCVVD
IKACNFLMNR MTEFGKIGML MTLFKQLKQL GLCANEYTYA IVVKALCRKG NLEEAAMLLI
ENESVFGYKT FINGLCVTGE TEKAVALILE LIDRKYLAGD DLRAVLGMVV RGFCNEMKMK
AAESVIIEME EIGFGLDVYA CLAVIDRYCK NMNLPEALGF LDKMLGKGLK VNCVIVSLIL
QCYCKMDMCL EALEKFKEFR DMNIFLDRVC YNVAFDALSK LGRVEEAFEL LQEMKDRGIV
PDVINYTTLI DGYCLQGKVV DALDLIDEMI GNGMSPDLIT YNVLVSGLAR NGHEEEVLEI
YERMKAEGPK PNAVTNSVII EGLCFARKVK EAEDFFSSLE QKCPENKASF VKGYCEAGLS
KKAYKAFVRL EYPLRKSVYI KLFFSLCIEG YLEKAHDVLK KMSAYRVEPG RSMCGKMIGA
FCKLNNVREA QVLFDTMVER GLIPDLFTYT IMIHTYCRLN ELQKAESLFE DMKQRGIKPD
VVTYTVLLDR YLKLDPEHHE TCSVQGEVGK RKASEVLREF SAAGIGLDVV CYTVLIDRQC
KMNNLEQAAE LFDRMIDSGL EPDMVAYTTL ISSYFRKGYI DMAVTLVTEL SKKYNIPSES
FEAAVKSAAL KAKRFQYGE
