ID   PP174_ARATH             Reviewed;         462 AA.
AC   Q9ZUU7;
DT   16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT   01-MAY-1999, sequence version 1.
DT   25-MAY-2022, entry version 103.
DE   RecName: Full=Pentatricopeptide repeat-containing protein At2g28050;
GN   OrderedLocusNames=At2g28050; ORFNames=F24D13.16, T1E2.3;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10617197; DOI=10.1038/45471;
RA   Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA   Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA   Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA   Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA   Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA   Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA   Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT   "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL   Nature 402:761-768(1999).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   GENE FAMILY.
RX   PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA   Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA   Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA   Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA   Taconnat L., Small I.;
RT   "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT   reveals their essential role in organelle biogenesis.";
RL   Plant Cell 16:2089-2103(2004).
CC   -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC   -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC       URL="https://ppr.plantenergy.uwa.edu.au";
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DR   EMBL; AC005851; AAC98461.1; -; Genomic_DNA.
DR   EMBL; AC006929; AAM15326.1; -; Genomic_DNA.
DR   EMBL; CP002685; AEC08073.1; -; Genomic_DNA.
DR   PIR; B84680; B84680.
DR   RefSeq; NP_180372.1; NM_128364.2.
DR   AlphaFoldDB; Q9ZUU7; -.
DR   SMR; Q9ZUU7; -.
DR   STRING; 3702.AT2G28050.1; -.
DR   iPTMnet; Q9ZUU7; -.
DR   PaxDb; Q9ZUU7; -.
DR   PRIDE; Q9ZUU7; -.
DR   EnsemblPlants; AT2G28050.1; AT2G28050.1; AT2G28050.
DR   GeneID; 817349; -.
DR   Gramene; AT2G28050.1; AT2G28050.1; AT2G28050.
DR   KEGG; ath:AT2G28050; -.
DR   Araport; AT2G28050; -.
DR   TAIR; locus:2046218; AT2G28050.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_49_12_1; -.
DR   InParanoid; Q9ZUU7; -.
DR   OMA; DACAKRW; -.
DR   OrthoDB; 1344243at2759; -.
DR   PhylomeDB; Q9ZUU7; -.
DR   PRO; PR:Q9ZUU7; -.
DR   Proteomes; UP000006548; Chromosome 2.
DR   ExpressionAtlas; Q9ZUU7; baseline and differential.
DR   Genevisible; Q9ZUU7; AT.
DR   GO; GO:0005739; C:mitochondrion; IEA:GOC.
DR   GO; GO:0090617; P:mitochondrial mRNA 5'-end processing; IMP:TAIR.
DR   Gene3D; 1.25.40.10; -; 3.
DR   InterPro; IPR002885; Pentatricopeptide_repeat.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   Pfam; PF01535; PPR; 4.
DR   Pfam; PF13041; PPR_2; 2.
DR   TIGRFAMs; TIGR00756; PPR; 4.
DR   PROSITE; PS51375; PPR; 8.
PE   3: Inferred from homology;
KW   Reference proteome; Repeat.
FT   CHAIN           1..462
FT                   /note="Pentatricopeptide repeat-containing protein
FT                   At2g28050"
FT                   /id="PRO_0000356033"
FT   REPEAT          138..172
FT                   /note="PPR 1"
FT   REPEAT          173..207
FT                   /note="PPR 2"
FT   REPEAT          209..243
FT                   /note="PPR 3"
FT   REPEAT          245..279
FT                   /note="PPR 4"
FT   REPEAT          280..314
FT                   /note="PPR 5"
FT   REPEAT          315..349
FT                   /note="PPR 6"
FT   REPEAT          350..384
FT                   /note="PPR 7"
FT   REPEAT          385..419
FT                   /note="PPR 8"
SQ   SEQUENCE   462 AA;  52931 MW;  169BB23476473F0F CRC64;
     MTPQCFLKTL KTAKQTYTFS IYKLLLNSSS INQTLASPET PLSDLNLSTL RRILSDPDIK
     SWKCISLFNF ILENPSLFSF QPDLRTHLSL TFRVLSERRF SYAKELLKPV AIDDILRYPF
     NVIVSSVIDE CGCEKKVVGR FFNSMIMVYS DNGKFSEVVE VFEYMKNNEV KIDEKTCTLH
     LLNLKRCDQM ELARDFFSLM VESGIDVVTV YSLTVVVTVL CCNGEITRAR ELVEEMGLVK
     GVKANIVTFK SMIGCCVKRW DFEELDLVLK LMEKESVMLD LDSYKVLIDG FTSYGKVEEA
     ERLVLMMHDK KLRVESYLYN LIMNGYSRFG LVEKVIELYS EMSSRGVTPN KDTYWVLMNG
     LCKAGKVCEA MSFLNELRVN EFEIDEEMYS TLSEECYRVG MIDKSLEVVA EMIRDGFIPG
     ATICERLADS LFEVNRKEAQ MLITIVVKCG IKPKSCSQYG LK