PP177_ARATH
ID PP177_ARATH Reviewed; 452 AA.
AC O49343;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-1998, sequence version 1.
DT 03-AUG-2022, entry version 117.
DE RecName: Full=Pentatricopeptide repeat-containing protein At2g30780;
GN OrderedLocusNames=At2g30780; ORFNames=T11J7.17;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AC002340; AAC02749.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC08440.1; -; Genomic_DNA.
DR EMBL; CP002685; ANM62653.1; -; Genomic_DNA.
DR EMBL; AK228453; BAF00380.1; -; mRNA.
DR PIR; F84712; F84712.
DR RefSeq; NP_001324795.1; NM_001336302.1.
DR RefSeq; NP_180636.1; NM_128631.4.
DR AlphaFoldDB; O49343; -.
DR SMR; O49343; -.
DR PaxDb; O49343; -.
DR PRIDE; O49343; -.
DR ProteomicsDB; 249146; -.
DR EnsemblPlants; AT2G30780.1; AT2G30780.1; AT2G30780.
DR EnsemblPlants; AT2G30780.2; AT2G30780.2; AT2G30780.
DR GeneID; 817629; -.
DR Gramene; AT2G30780.1; AT2G30780.1; AT2G30780.
DR Gramene; AT2G30780.2; AT2G30780.2; AT2G30780.
DR KEGG; ath:AT2G30780; -.
DR Araport; AT2G30780; -.
DR TAIR; locus:2054462; AT2G30780.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_034990_0_0_1; -.
DR InParanoid; O49343; -.
DR OMA; IPENEYR; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; O49343; -.
DR PRO; PR:O49343; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; O49343; baseline and differential.
DR Genevisible; O49343; AT.
DR GO; GO:0003729; F:mRNA binding; IDA:TAIR.
DR Gene3D; 1.25.40.10; -; 3.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR044179; PPR5-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR PANTHER; PTHR47874; PTHR47874; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF13041; PPR_2; 2.
DR TIGRFAMs; TIGR00756; PPR; 3.
DR PROSITE; PS51375; PPR; 7.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat.
FT CHAIN 1..452
FT /note="Pentatricopeptide repeat-containing protein
FT At2g30780"
FT /id="PRO_0000356036"
FT REPEAT 137..171
FT /note="PPR 1"
FT REPEAT 173..207
FT /note="PPR 2"
FT REPEAT 208..242
FT /note="PPR 3"
FT REPEAT 243..273
FT /note="PPR 4"
FT REPEAT 350..384
FT /note="PPR 5"
FT REPEAT 385..419
FT /note="PPR 6"
FT REPEAT 420..452
FT /note="PPR 7"
SQ SEQUENCE 452 AA; 52027 MW; DBF4E95C66B68E9A CRC64;
MASNFVKLGS QFIGKLTRVT SLPAHHTDLV QRVSILKDEL LTIGNSKEKF QNVLDQKGQW
LFRTYRDGAG ILELMDQLFP RHYLALQVLE WRRGQKDYCI PLTSEEYAKG IKIAGRARDI
NLAVYLFDEA AKKRMQTASV YNSLMSVYMW NGLAEECQSL FKDFRRQTHC APTVVTYNIL
VSVYGRLLMV KNMEAAFEEL QKVKLPPNSV TYNFLIAGYM TAWNWDKMEA TFQEMKRGPV
EPDTDTYQLM LRGYANSGNL NRMEEMYEVI KDQVGVNSGP LVRAMICAYC KKAVEDRVQK
IENLLSLLSG EEYLPWLNVL LIRLYAQEDF VEAMESKINE AFEQKTCVNK SSIMRAIIAA
YFRCNEVDNL ANFVKRAESA GWKLCRSLYH CKIMMYGSQK RFEEMEGVVN EMAETNYGLV
TKTFAIMIKA YKNHGMESDA EKVKGKMLKR GL
