PP180_ARATH
ID PP180_ARATH Reviewed; 624 AA.
AC Q8S8P6;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2002, sequence version 1.
DT 03-AUG-2022, entry version 108.
DE RecName: Full=Pentatricopeptide repeat-containing protein At2g32630;
GN OrderedLocusNames=At2g32630; ORFNames=T26B15.19;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AC004681; AAM14987.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC08707.1; -; Genomic_DNA.
DR PIR; T02562; T02562.
DR RefSeq; NP_180822.1; NM_128822.2.
DR AlphaFoldDB; Q8S8P6; -.
DR SMR; Q8S8P6; -.
DR PaxDb; Q8S8P6; -.
DR PRIDE; Q8S8P6; -.
DR ProteomicsDB; 249149; -.
DR EnsemblPlants; AT2G32630.1; AT2G32630.1; AT2G32630.
DR GeneID; 817823; -.
DR Gramene; AT2G32630.1; AT2G32630.1; AT2G32630.
DR KEGG; ath:AT2G32630; -.
DR Araport; AT2G32630; -.
DR TAIR; locus:2060226; AT2G32630.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_12_1; -.
DR InParanoid; Q8S8P6; -.
DR OMA; MIYDVME; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q8S8P6; -.
DR PRO; PR:Q8S8P6; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q8S8P6; baseline and differential.
DR Genevisible; Q8S8P6; AT.
DR Gene3D; 1.25.40.10; -; 6.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR033443; PPR_long.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 4.
DR Pfam; PF17177; PPR_long; 1.
DR TIGRFAMs; TIGR00756; PPR; 12.
DR PROSITE; PS51375; PPR; 14.
PE 3: Inferred from homology;
KW Reference proteome; Repeat.
FT CHAIN 1..624
FT /note="Pentatricopeptide repeat-containing protein
FT At2g32630"
FT /id="PRO_0000356039"
FT REPEAT 153..187
FT /note="PPR 1"
FT REPEAT 188..222
FT /note="PPR 2"
FT REPEAT 223..257
FT /note="PPR 3"
FT REPEAT 258..292
FT /note="PPR 4"
FT REPEAT 293..327
FT /note="PPR 5"
FT REPEAT 328..362
FT /note="PPR 6"
FT REPEAT 363..397
FT /note="PPR 7"
FT REPEAT 398..432
FT /note="PPR 8"
FT REPEAT 433..467
FT /note="PPR 9"
FT REPEAT 468..502
FT /note="PPR 10"
FT REPEAT 503..537
FT /note="PPR 11"
FT REPEAT 538..572
FT /note="PPR 12"
FT REPEAT 573..607
FT /note="PPR 13"
SQ SEQUENCE 624 AA; 70895 MW; 0E0D3E6A4F078D4B CRC64;
MNMSSSSRKL SRLFNIVTQN QKSPVLLSSD QEAARRITAC LVEKSTIGKL QSNPSLLFNL
NSNVTRLVLS EPTLPTQSCI DFFKLLREFE SNLKPDLTAV VTLSHRLYSN RRFNEMRSLL
NSVVNDGFYK RPVEELGSAM VDCDISEEKF EFFEKFFDLV FRVYVDNGMF EEGLRVFDYM
VKKGLSIDER SCIVFLVAAK KRRRIDLCLE IFRRMVDSGV KITVYSLTIV VEGLCRRGEV
EKSKKLIKEF SVKGIKPEAY TYNTIINAYV KQRDFSGVEG VLKVMKKDGV VYNKVTYTLL
MELSVKNGKM SDAEKLFDEM RERGIESDVH VYTSLISWNC RKGNMKRAFL LFDELTEKGL
SPSSYTYGAL IDGVCKVGEM GAAEILMNEM QSKGVNITQV VFNTLIDGYC RKGMVDEASM
IYDVMEQKGF QADVFTCNTI ASCFNRLKRY DEAKQWLFRM MEGGVKLSTV SYTNLIDVYC
KEGNVEEAKR LFVEMSSKGV QPNAITYNVM IYAYCKQGKI KEARKLRANM EANGMDPDSY
TYTSLIHGEC IADNVDEAMR LFSEMGLKGL DQNSVTYTVM ISGLSKAGKS DEAFGLYDEM
KRKGYTIDNK VYTALIGSMH SPET