PP182_ARATH
ID PP182_ARATH Reviewed; 583 AA.
AC P93011;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-1997, sequence version 1.
DT 25-MAY-2022, entry version 126.
DE RecName: Full=Pentatricopeptide repeat-containing protein At2g33760;
GN Name=PCMP-H6; OrderedLocusNames=At2g33760; ORFNames=T1B8.7;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=10809006; DOI=10.1023/a:1006352315928;
RA Aubourg S., Boudet N., Kreis M., Lecharny A.;
RT "In Arabidopsis thaliana, 1% of the genome codes for a novel protein family
RT unique to plants.";
RL Plant Mol. Biol. 42:603-613(2000).
RN [4]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; U78721; AAC69141.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC08881.1; -; Genomic_DNA.
DR PIR; C84749; C84749.
DR RefSeq; NP_180932.1; NM_128935.1.
DR AlphaFoldDB; P93011; -.
DR SMR; P93011; -.
DR STRING; 3702.AT2G33760.1; -.
DR iPTMnet; P93011; -.
DR PaxDb; P93011; -.
DR PRIDE; P93011; -.
DR ProteomicsDB; 249151; -.
DR EnsemblPlants; AT2G33760.1; AT2G33760.1; AT2G33760.
DR GeneID; 817942; -.
DR Gramene; AT2G33760.1; AT2G33760.1; AT2G33760.
DR KEGG; ath:AT2G33760; -.
DR Araport; AT2G33760; -.
DR TAIR; locus:2057574; AT2G33760.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_37_1_1; -.
DR InParanoid; P93011; -.
DR OMA; FYQMRES; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; P93011; -.
DR PRO; PR:P93011; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; P93011; baseline and differential.
DR Genevisible; P93011; AT.
DR GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; -; 4.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 2.
DR SUPFAM; SSF48452; SSF48452; 1.
DR TIGRFAMs; TIGR00756; PPR; 5.
DR PROSITE; PS51375; PPR; 10.
PE 3: Inferred from homology;
KW Reference proteome; Repeat.
FT CHAIN 1..583
FT /note="Pentatricopeptide repeat-containing protein
FT At2g33760"
FT /id="PRO_0000356041"
FT REPEAT 71..105
FT /note="PPR 1"
FT REPEAT 106..140
FT /note="PPR 2"
FT REPEAT 141..171
FT /note="PPR 3"
FT REPEAT 172..206
FT /note="PPR 4"
FT REPEAT 207..241
FT /note="PPR 5"
FT REPEAT 242..276
FT /note="PPR 6"
FT REPEAT 277..303
FT /note="PPR 7"
FT REPEAT 309..339
FT /note="PPR 8"
FT REPEAT 345..379
FT /note="PPR 9"
FT REGION 383..458
FT /note="Type E motif"
FT REGION 459..489
FT /note="Type E(+) motif"
FT REGION 490..583
FT /note="Type DYW motif"
SQ SEQUENCE 583 AA; 64858 MW; 1115E89C8D6CB0A1 CRC64;
MTTKVAANSA AYEAIVRAGP RVKQLQQVHA HLIVTGYGRS RSLLTKLITL ACSARAIAYT
HLLFLSVPLP DDFLFNSVIK STSKLRLPLH CVAYYRRMLS SNVSPSNYTF TSVIKSCADL
SALRIGKGVH CHAVVSGFGL DTYVQAALVT FYSKCGDMEG ARQVFDRMPE KSIVAWNSLV
SGFEQNGLAD EAIQVFYQMR ESGFEPDSAT FVSLLSACAQ TGAVSLGSWV HQYIISEGLD
LNVKLGTALI NLYSRCGDVG KAREVFDKMK ETNVAAWTAM ISAYGTHGYG QQAVELFNKM
EDDCGPIPNN VTFVAVLSAC AHAGLVEEGR SVYKRMTKSY RLIPGVEHHV CMVDMLGRAG
FLDEAYKFIH QLDATGKATA PALWTAMLGA CKMHRNYDLG VEIAKRLIAL EPDNPGHHVM
LSNIYALSGK TDEVSHIRDG MMRNNLRKQV GYSVIEVENK TYMFSMGDES HQETGEIYRY
LETLISRCKE IGYAPVSEEV MHQVEEEEKE FALRYHSEKL AVAFGLLKTV DVAITIVKNL
RICEDCHSAF KYISIVSNRQ ITVRDKLRFH HFQNGSCSCL DYW
