PP184_ARATH
ID PP184_ARATH Reviewed; 621 AA.
AC O64705;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 16-DEC-2008, sequence version 2.
DT 03-AUG-2022, entry version 126.
DE RecName: Full=Pentatricopeptide repeat-containing protein At2g34400;
GN Name=PCMP-E23; OrderedLocusNames=At2g34400; ORFNames=F13P17.24, T31E10.26;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=10809006; DOI=10.1023/a:1006352315928;
RA Aubourg S., Boudet N., Kreis M., Lecharny A.;
RT "In Arabidopsis thaliana, 1% of the genome codes for a novel protein family
RT unique to plants.";
RL Plant Mol. Biol. 42:603-613(2000).
RN [4]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-E subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAC26711.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC Sequence=AAM14947.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AC004077; AAC26711.1; ALT_INIT; Genomic_DNA.
DR EMBL; AC004481; AAM14947.1; ALT_INIT; Genomic_DNA.
DR EMBL; CP002685; AEC08968.1; -; Genomic_DNA.
DR PIR; T02328; T02328.
DR RefSeq; NP_180987.2; NM_128992.3.
DR AlphaFoldDB; O64705; -.
DR SMR; O64705; -.
DR PaxDb; O64705; -.
DR PRIDE; O64705; -.
DR ProteomicsDB; 249078; -.
DR EnsemblPlants; AT2G34400.1; AT2G34400.1; AT2G34400.
DR GeneID; 818003; -.
DR Gramene; AT2G34400.1; AT2G34400.1; AT2G34400.
DR KEGG; ath:AT2G34400; -.
DR Araport; AT2G34400; -.
DR TAIR; locus:2040924; AT2G34400.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_0_1_1; -.
DR InParanoid; O64705; -.
DR OMA; HTQMLIN; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; O64705; -.
DR PRO; PR:O64705; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; O64705; baseline and differential.
DR Genevisible; O64705; AT.
DR Gene3D; 1.25.40.10; -; 4.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF13041; PPR_2; 4.
DR SUPFAM; SSF48452; SSF48452; 1.
DR TIGRFAMs; TIGR00756; PPR; 7.
DR PROSITE; PS51375; PPR; 14.
PE 3: Inferred from homology;
KW Reference proteome; Repeat.
FT CHAIN 1..621
FT /note="Pentatricopeptide repeat-containing protein
FT At2g34400"
FT /id="PRO_0000356043"
FT REPEAT 95..130
FT /note="PPR 1"
FT REPEAT 131..165
FT /note="PPR 2"
FT REPEAT 166..196
FT /note="PPR 3"
FT REPEAT 197..231
FT /note="PPR 4"
FT REPEAT 232..266
FT /note="PPR 5"
FT REPEAT 267..297
FT /note="PPR 6"
FT REPEAT 298..332
FT /note="PPR 7"
FT REPEAT 333..367
FT /note="PPR 8"
FT REPEAT 368..398
FT /note="PPR 9"
FT REPEAT 399..429
FT /note="PPR 10"
FT REPEAT 431..461
FT /note="PPR 11"
FT REPEAT 467..497
FT /note="PPR 12"
FT REGION 502..578
FT /note="Type E motif"
FT REGION 579..610
FT /note="Type E(+) motif"
SQ SEQUENCE 621 AA; 70532 MW; DDCF3B83A920CF55 CRC64;
MSLQMLIKPE KLAFSIYRQF PKFKPRQFEE ARRGDLERDF LFLLKKCISV NQLRQIQAQM
LLHSVEKPNF LIPKAVELGD FNYSSFLFSV TEEPNHYSFN YMIRGLTNTW NDHEAALSLY
RRMKFSGLKP DKFTYNFVFI ACAKLEEIGV GRSVHSSLFK VGLERDVHIN HSLIMMYAKC
GQVGYARKLF DEITERDTVS WNSMISGYSE AGYAKDAMDL FRKMEEEGFE PDERTLVSML
GACSHLGDLR TGRLLEEMAI TKKIGLSTFL GSKLISMYGK CGDLDSARRV FNQMIKKDRV
AWTAMITVYS QNGKSSEAFK LFFEMEKTGV SPDAGTLSTV LSACGSVGAL ELGKQIETHA
SELSLQHNIY VATGLVDMYG KCGRVEEALR VFEAMPVKNE ATWNAMITAY AHQGHAKEAL
LLFDRMSVPP SDITFIGVLS ACVHAGLVHQ GCRYFHEMSS MFGLVPKIEH YTNIIDLLSR
AGMLDEAWEF MERFPGKPDE IMLAAILGAC HKRKDVAIRE KAMRMLMEMK EAKNAGNYVI
SSNVLADMKM WDESAKMRAL MRDRGVVKTP GCSWIEIEGE LMEFLAGSDY LQCGREDSGS
LFDLLVEEMK RERYEFGYIH L
