PP205_ARATH
ID PP205_ARATH Reviewed; 660 AA.
AC Q9SS97;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 16-DEC-2008, sequence version 2.
DT 03-AUG-2022, entry version 123.
DE RecName: Full=Putative pentatricopeptide repeat-containing protein At3g01580;
GN Name=PCMP-E87; OrderedLocusNames=At3g01580; ORFNames=F4P13.34;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-E subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF01561.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AC009325; AAF01561.1; ALT_INIT; Genomic_DNA.
DR EMBL; CP002686; AEE73691.1; -; Genomic_DNA.
DR RefSeq; NP_186807.2; NM_111024.3.
DR AlphaFoldDB; Q9SS97; -.
DR SMR; Q9SS97; -.
DR STRING; 3702.AT3G01580.1; -.
DR PaxDb; Q9SS97; -.
DR PRIDE; Q9SS97; -.
DR ProteomicsDB; 249166; -.
DR EnsemblPlants; AT3G01580.1; AT3G01580.1; AT3G01580.
DR GeneID; 821107; -.
DR Gramene; AT3G01580.1; AT3G01580.1; AT3G01580.
DR KEGG; ath:AT3G01580; -.
DR Araport; AT3G01580; -.
DR TAIR; locus:2084188; AT3G01580.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_15_1_1; -.
DR InParanoid; Q9SS97; -.
DR OMA; DPDHAGY; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9SS97; -.
DR PRO; PR:Q9SS97; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9SS97; baseline and differential.
DR Genevisible; Q9SS97; AT.
DR Gene3D; 1.25.40.10; -; 5.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 3.
DR Pfam; PF13041; PPR_2; 2.
DR SUPFAM; SSF48452; SSF48452; 1.
DR TIGRFAMs; TIGR00756; PPR; 5.
DR PROSITE; PS51375; PPR; 15.
PE 3: Inferred from homology;
KW Reference proteome; Repeat.
FT CHAIN 1..660
FT /note="Putative pentatricopeptide repeat-containing protein
FT At3g01580"
FT /id="PRO_0000356064"
FT REPEAT 24..58
FT /note="PPR 1"
FT REPEAT 59..89
FT /note="PPR 2"
FT REPEAT 95..125
FT /note="PPR 3"
FT REPEAT 126..161
FT /note="PPR 4"
FT REPEAT 162..196
FT /note="PPR 5"
FT REPEAT 197..227
FT /note="PPR 6"
FT REPEAT 228..262
FT /note="PPR 7"
FT REPEAT 263..297
FT /note="PPR 8"
FT REPEAT 298..328
FT /note="PPR 9"
FT REPEAT 329..364
FT /note="PPR 10"
FT REPEAT 365..399
FT /note="PPR 11"
FT REPEAT 400..430
FT /note="PPR 12"
FT REPEAT 431..466
FT /note="PPR 13"
FT REPEAT 467..497
FT /note="PPR 14"
FT REPEAT 503..533
FT /note="PPR 15"
FT REGION 538..613
FT /note="Type E motif"
FT REGION 614..644
FT /note="Type E(+) motif"
SQ SEQUENCE 660 AA; 74320 MW; 0BA318A551616B23 CRC64;
MGFCRKFSSS VDARQMFGEM TKRSLYQWNT LLKSLSREKQ WEEVLYHFSH MFRDEEKPDN
FTLPVALKAC GELREVNYGE MIHGFVKKDV TLGSDLYVGS SLIYMYIKCG RMIEALRMFD
ELEKPDIVTW SSMVSGFEKN GSPYQAVEFF RRMVMASDVT PDRVTLITLV SACTKLSNSR
LGRCVHGFVI RRGFSNDLSL VNSLLNCYAK SRAFKEAVNL FKMIAEKDVI SWSTVIACYV
QNGAAAEALL VFNDMMDDGT EPNVATVLCV LQACAAAHDL EQGRKTHELA IRKGLETEVK
VSTALVDMYM KCFSPEEAYA VFSRIPRKDV VSWVALISGF TLNGMAHRSI EEFSIMLLEN
NTRPDAILMV KVLGSCSELG FLEQAKCFHS YVIKYGFDSN PFIGASLVEL YSRCGSLGNA
SKVFNGIALK DTVVWTSLIT GYGIHGKGTK ALETFNHMVK SSEVKPNEVT FLSILSACSH
AGLIHEGLRI FKLMVNDYRL APNLEHYAVL VDLLGRVGDL DTAIEITKRM PFSPTPQILG
TLLGACRIHQ NGEMAETVAK KLFELESNHA GYYMLMSNVY GVKGEWENVE KLRNSVKQRG
IKKGLAESLI EIRRKVHRFV ADDELHPEKE PVYGLLKELD LHMKEDLENC VYFEYEGDSL
