ID   PP209_ARATH             Reviewed;         576 AA.
AC   P0C896; Q9M877;
DT   16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT   16-DEC-2008, sequence version 1.
DT   25-MAY-2022, entry version 78.
DE   RecName: Full=Pentatricopeptide repeat-containing protein At3g02650, mitochondrial;
DE   Flags: Precursor;
GN   OrderedLocusNames=At3g02650; ORFNames=F16B3.28;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130713; DOI=10.1038/35048706;
RA   Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA   Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA   Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA   Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA   Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA   Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA   Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA   Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA   Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA   Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA   Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA   Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA   de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA   Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA   Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA   Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA   Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA   Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA   Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA   Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA   Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA   Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA   Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA   Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT   "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL   Nature 408:820-822(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=14993207; DOI=10.1101/gr.1515604;
RA   Castelli V., Aury J.-M., Jaillon O., Wincker P., Clepet C., Menard M.,
RA   Cruaud C., Quetier F., Scarpelli C., Schaechter V., Temple G., Caboche M.,
RA   Weissenbach J., Salanoubat M.;
RT   "Whole genome sequence comparisons and 'full-length' cDNA sequences: a
RT   combined approach to evaluate and improve Arabidopsis genome annotation.";
RL   Genome Res. 14:406-413(2004).
RN   [4]
RP   GENE FAMILY.
RX   PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA   Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA   Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA   Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA   Taconnat L., Small I.;
RT   "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT   reveals their essential role in organelle biogenesis.";
RL   Plant Cell 16:2089-2103(2004).
CC   -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAF32472.1; Type=Erroneous gene model prediction; Note=The predicted gene has been split into 2 genes: At3g02645 and At3g02650.; Evidence={ECO:0000305};
CC       Sequence=BX836963; Type=Miscellaneous discrepancy; Note=Sequencing errors.; Evidence={ECO:0000305};
CC   -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC       URL="https://ppr.plantenergy.uwa.edu.au";
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DR   EMBL; AC021640; AAF32472.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; CP002686; AEE73844.1; -; Genomic_DNA.
DR   EMBL; BX836963; -; NOT_ANNOTATED_CDS; mRNA.
DR   RefSeq; NP_186914.2; NM_111133.4.
DR   PDB; 6XYW; EM; 3.86 A; BG=1-576.
DR   PDBsum; 6XYW; -.
DR   AlphaFoldDB; P0C896; -.
DR   SMR; P0C896; -.
DR   BioGRID; 6618; 4.
DR   IntAct; P0C896; 1.
DR   STRING; 3702.AT3G02650.1; -.
DR   PaxDb; P0C896; -.
DR   PRIDE; P0C896; -.
DR   ProteomicsDB; 249087; -.
DR   EnsemblPlants; AT3G02650.1; AT3G02650.1; AT3G02650.
DR   GeneID; 821285; -.
DR   Gramene; AT3G02650.1; AT3G02650.1; AT3G02650.
DR   KEGG; ath:AT3G02650; -.
DR   Araport; AT3G02650; -.
DR   TAIR; locus:2076859; AT3G02650.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_029890_0_0_1; -.
DR   InParanoid; P0C896; -.
DR   OMA; LMRVMEN; -.
DR   OrthoDB; 1344243at2759; -.
DR   PhylomeDB; P0C896; -.
DR   PRO; PR:P0C896; -.
DR   Proteomes; UP000006548; Chromosome 3.
DR   ExpressionAtlas; P0C896; baseline and differential.
DR   Genevisible; P0C896; AT.
DR   GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR   GO; GO:0003729; F:mRNA binding; IDA:TAIR.
DR   Gene3D; 1.25.40.10; -; 3.
DR   InterPro; IPR002885; Pentatricopeptide_repeat.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   Pfam; PF01535; PPR; 4.
DR   Pfam; PF13041; PPR_2; 2.
DR   TIGRFAMs; TIGR00756; PPR; 5.
DR   PROSITE; PS51375; PPR; 8.
PE   1: Evidence at protein level;
KW   3D-structure; Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT   TRANSIT         1..76
FT                   /note="Mitochondrion"
FT                   /evidence="ECO:0000255"
FT   CHAIN           77..576
FT                   /note="Pentatricopeptide repeat-containing protein
FT                   At3g02650, mitochondrial"
FT                   /id="PRO_0000356068"
FT   REPEAT          230..264
FT                   /note="PPR 1"
FT   REPEAT          265..299
FT                   /note="PPR 2"
FT   REPEAT          300..336
FT                   /note="PPR 3"
FT   REPEAT          341..370
FT                   /note="PPR 4"
FT   REPEAT          371..405
FT                   /note="PPR 5"
FT   REPEAT          406..440
FT                   /note="PPR 6"
FT   REPEAT          441..475
FT                   /note="PPR 7"
FT   REPEAT          476..510
FT                   /note="PPR 8"
FT   REPEAT          511..546
FT                   /note="PPR 9"
SQ   SEQUENCE   576 AA;  63838 MW;  E21976FFF167DBDE CRC64;
     MLRSFLCRSQ NASRNLAVTR ISKKKTQTTH SLTSLSRFSY LESSGNASVR NIRFFSTSPP
     TEENPVSLPA DEIPISSAAE LTLEESVASA LGFSESGDYG GTSVEAVGED GDSEIVAIEN
     EVYQFDDEKL ESVLSLLRSD EESLEFGLNA LNVDLHLDFV VRVFESPGIS GKNLIRFLKW
     ATQNEEITVT TSLVESLLVA IASDTRRMDA YGLWDLVKEI GEKESCGVLN LEILNELIAL
     FGKLGKSKAA FDVFSKTEEF GFTPNAKTYY LTLEALCKRS FMDWACSVCE KMLKSGVLSE
     GEQMGNIITW FCKEGKAEEA YSVYELAKTK EKSLPPRFVA TLITALCKND GTITFAQEML
     GDLSGEARRR GIKPFSDVIH SLCRMRNVKD AKALLLDMIS KGPAPGNAVF NLVVHACSKT
     GDLDEAKEVL KLMESRGLKP DVYTYTVIIS GYAKGGMMDE AQEILAEAKK KHKKLSPVTY
     HALIRGYCKI EEYDEALKLL NEMDRFGVQP NADEYNKLIQ SFCLKALDWE KAEVLFEEMK
     QKGLHLNAIS QGLIRAVKEM ESEAKVTEDG NLLAEA