PP212_ARATH
ID PP212_ARATH Reviewed; 661 AA.
AC Q9SR01;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 25-MAY-2022, entry version 118.
DE RecName: Full=Pentatricopeptide repeat-containing protein At3g04750, mitochondrial;
DE Flags: Precursor;
GN Name=PCMP-E81; OrderedLocusNames=At3g04750; ORFNames=F7O18.24;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-E subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AC011437; AAF04901.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE74131.1; -; Genomic_DNA.
DR RefSeq; NP_187126.1; NM_111347.2.
DR AlphaFoldDB; Q9SR01; -.
DR SMR; Q9SR01; -.
DR PaxDb; Q9SR01; -.
DR PRIDE; Q9SR01; -.
DR ProteomicsDB; 249171; -.
DR EnsemblPlants; AT3G04750.1; AT3G04750.1; AT3G04750.
DR GeneID; 819635; -.
DR Gramene; AT3G04750.1; AT3G04750.1; AT3G04750.
DR KEGG; ath:AT3G04750; -.
DR Araport; AT3G04750; -.
DR TAIR; locus:2084963; AT3G04750.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_0_1_1; -.
DR InParanoid; Q9SR01; -.
DR OMA; MPMKPSR; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9SR01; -.
DR PRO; PR:Q9SR01; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9SR01; baseline and differential.
DR Genevisible; Q9SR01; AT.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR Gene3D; 1.25.40.10; -; 3.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 5.
DR Pfam; PF13041; PPR_2; 2.
DR TIGRFAMs; TIGR00756; PPR; 4.
DR PROSITE; PS51375; PPR; 10.
PE 2: Evidence at transcript level;
KW Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT TRANSIT 1..18
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 19..661
FT /note="Pentatricopeptide repeat-containing protein
FT At3g04750, mitochondrial"
FT /id="PRO_0000356071"
FT REPEAT 99..131
FT /note="PPR 1"
FT REPEAT 132..163
FT /note="PPR 2"
FT REPEAT 165..195
FT /note="PPR 3"
FT REPEAT 196..230
FT /note="PPR 4"
FT REPEAT 231..265
FT /note="PPR 5"
FT REPEAT 268..298
FT /note="PPR 6"
FT REPEAT 299..333
FT /note="PPR 7"
FT REPEAT 334..366
FT /note="PPR 8"
FT REPEAT 367..401
FT /note="PPR 9"
FT REPEAT 402..432
FT /note="PPR 10"
FT REPEAT 433..467
FT /note="PPR 11"
FT REPEAT 468..498
FT /note="PPR 12"
FT REPEAT 504..539
FT /note="PPR 13"
FT REGION 540..615
FT /note="Type E motif"
FT REGION 616..647
FT /note="Type E(+) motif"
SQ SEQUENCE 661 AA; 74767 MW; D5F7B443A842CAE3 CRC64;
MCFVLLLRRG FRLFGTECGS KTTKWDPVQS LQLNHQSLVL LENCNSRNQF KQVLAQIMRF
NLICDTFPMS RLIFFSAITY PENLDLAKLL FLNFTPNPNV FVYNTMISAV SSSKNECFGL
YSSMIRHRVS PDRQTFLYLM KASSFLSEVK QIHCHIIVSG CLSLGNYLWN SLVKFYMELG
NFGVAEKVFA RMPHPDVSSF NVMIVGYAKQ GFSLEALKLY FKMVSDGIEP DEYTVLSLLV
CCGHLSDIRL GKGVHGWIER RGPVYSSNLI LSNALLDMYF KCKESGLAKR AFDAMKKKDM
RSWNTMVVGF VRLGDMEAAQ AVFDQMPKRD LVSWNSLLFG YSKKGCDQRT VRELFYEMTI
VEKVKPDRVT MVSLISGAAN NGELSHGRWV HGLVIRLQLK GDAFLSSALI DMYCKCGIIE
RAFMVFKTAT EKDVALWTSM ITGLAFHGNG QQALQLFGRM QEEGVTPNNV TLLAVLTACS
HSGLVEEGLH VFNHMKDKFG FDPETEHYGS LVDLLCRAGR VEEAKDIVQK KMPMRPSQSM
WGSILSACRG GEDIETAELA LTELLKLEPE KEGGYVLLSN IYATVGRWGY SDKTREAMEN
RGVKKTAGYS SVVGVEGLHR FVAAEKQNHP RWTEIKRILQ HLYNEMKPKL DCLDLLEIEI
K