PP218_ARATH
ID PP218_ARATH Reviewed; 880 AA.
AC Q9SFV9;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 113.
DE RecName: Full=Pentatricopeptide repeat-containing protein At3g07290, mitochondrial;
DE Flags: Precursor;
GN OrderedLocusNames=At3g07290; ORFNames=T1B9.4;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AC012395; AAF20217.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE74523.1; -; Genomic_DNA.
DR RefSeq; NP_187385.1; NM_111609.2.
DR AlphaFoldDB; Q9SFV9; -.
DR SMR; Q9SFV9; -.
DR PaxDb; Q9SFV9; -.
DR PRIDE; Q9SFV9; -.
DR ProteomicsDB; 248943; -.
DR EnsemblPlants; AT3G07290.1; AT3G07290.1; AT3G07290.
DR GeneID; 819917; -.
DR Gramene; AT3G07290.1; AT3G07290.1; AT3G07290.
DR KEGG; ath:AT3G07290; -.
DR Araport; AT3G07290; -.
DR TAIR; locus:2098495; AT3G07290.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_2_1; -.
DR InParanoid; Q9SFV9; -.
DR OMA; YVECLME; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9SFV9; -.
DR PRO; PR:Q9SFV9; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9SFV9; baseline and differential.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR Gene3D; 1.25.40.10; -; 6.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 4.
DR Pfam; PF13812; PPR_3; 1.
DR TIGRFAMs; TIGR00756; PPR; 10.
DR PROSITE; PS51375; PPR; 18.
PE 2: Evidence at transcript level;
KW Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT TRANSIT 1..89
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 90..880
FT /note="Pentatricopeptide repeat-containing protein
FT At3g07290, mitochondrial"
FT /id="PRO_0000356077"
FT REPEAT 159..193
FT /note="PPR 1"
FT REPEAT 194..228
FT /note="PPR 2"
FT REPEAT 229..259
FT /note="PPR 3"
FT REPEAT 265..299
FT /note="PPR 4"
FT REPEAT 300..334
FT /note="PPR 5"
FT REPEAT 335..369
FT /note="PPR 6"
FT REPEAT 370..404
FT /note="PPR 7"
FT REPEAT 405..439
FT /note="PPR 8"
FT REPEAT 440..474
FT /note="PPR 9"
FT REPEAT 475..509
FT /note="PPR 10"
FT REPEAT 510..544
FT /note="PPR 11"
FT REPEAT 545..579
FT /note="PPR 12"
FT REPEAT 580..614
FT /note="PPR 13"
FT REPEAT 615..649
FT /note="PPR 14"
FT REPEAT 650..684
FT /note="PPR 15"
FT REPEAT 685..721
FT /note="PPR 16"
FT REPEAT 738..768
FT /note="PPR 17"
FT REPEAT 772..806
FT /note="PPR 18"
FT REPEAT 807..842
FT /note="PPR 19"
SQ SEQUENCE 880 AA; 98059 MW; 096C6D03214F51DE CRC64;
MLLIHIRSTR KILALGRHVF PSNAFFSVSS RPSLSSSDEV AAHDVASLLK TPNWEKNSSL
KSLVSHMNPN VASQVISLQR SDNDICVRFF MWVCKHSSYC FDPTQKNQLL KLIVSSGLYR
VAHAVIVALI KECSRCEKEM LKLMYCFDEL REVFGFRLNY PCYSSLLMSL AKLDLGFLAY
VTYRRMEADG FVVGMIDYRT IVNALCKNGY TEAAEMFMSK ILKIGFVLDS HIGTSLLLGF
CRGLNLRDAL KVFDVMSKEV TCAPNSVSYS ILIHGLCEVG RLEEAFGLKD QMGEKGCQPS
TRTYTVLIKA LCDRGLIDKA FNLFDEMIPR GCKPNVHTYT VLIDGLCRDG KIEEANGVCR
KMVKDRIFPS VITYNALING YCKDGRVVPA FELLTVMEKR ACKPNVRTFN ELMEGLCRVG
KPYKAVHLLK RMLDNGLSPD IVSYNVLIDG LCREGHMNTA YKLLSSMNCF DIEPDCLTFT
AIINAFCKQG KADVASAFLG LMLRKGISLD EVTGTTLIDG VCKVGKTRDA LFILETLVKM
RILTTPHSLN VILDMLSKGC KVKEELAMLG KINKLGLVPS VVTYTTLVDG LIRSGDITGS
FRILELMKLS GCLPNVYPYT IIINGLCQFG RVEEAEKLLS AMQDSGVSPN HVTYTVMVKG
YVNNGKLDRA LETVRAMVER GYELNDRIYS SLLQGFVLSQ KGIDNSEEST VSDIALRETD
PECINELISV VEQLGGCISG LCIFLVTRLC KEGRTDESND LVQNVLERGV FLEKAMDIIM
ESYCSKKKHT KCMELITLVL KSGFVPSFKS FCLVIQGLKK EGDAERAREL VMELLTSNGV
VEKSGVLTYV ECLMEGDETG DCSEVIDLVD QLHCRERPTF
