PP221_ARATH
ID PP221_ARATH Reviewed; 687 AA.
AC Q9SS81;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 111.
DE RecName: Full=Pentatricopeptide repeat-containing protein At3g09060;
GN OrderedLocusNames=At3g09060; ORFNames=MZB10.9;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AC009326; AAD56322.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE74715.1; -; Genomic_DNA.
DR EMBL; CP002686; ANM64999.1; -; Genomic_DNA.
DR RefSeq; NP_001319507.1; NM_001337799.1.
DR RefSeq; NP_187518.1; NM_111740.2.
DR AlphaFoldDB; Q9SS81; -.
DR SMR; Q9SS81; -.
DR PaxDb; Q9SS81; -.
DR PRIDE; Q9SS81; -.
DR ProteomicsDB; 249092; -.
DR EnsemblPlants; AT3G09060.1; AT3G09060.1; AT3G09060.
DR EnsemblPlants; AT3G09060.2; AT3G09060.2; AT3G09060.
DR GeneID; 820059; -.
DR Gramene; AT3G09060.1; AT3G09060.1; AT3G09060.
DR Gramene; AT3G09060.2; AT3G09060.2; AT3G09060.
DR KEGG; ath:AT3G09060; -.
DR Araport; AT3G09060; -.
DR TAIR; locus:2095309; AT3G09060.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_12_1; -.
DR InParanoid; Q9SS81; -.
DR OMA; KGLCSCN; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9SS81; -.
DR PRO; PR:Q9SS81; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9SS81; baseline and differential.
DR Genevisible; Q9SS81; AT.
DR Gene3D; 1.25.40.10; -; 8.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR033443; PPR_long.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 6.
DR Pfam; PF17177; PPR_long; 1.
DR TIGRFAMs; TIGR00756; PPR; 17.
DR PROSITE; PS51375; PPR; 18.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat.
FT CHAIN 1..687
FT /note="Pentatricopeptide repeat-containing protein
FT At3g09060"
FT /id="PRO_0000356080"
FT REPEAT 42..76
FT /note="PPR 1"
FT REPEAT 77..107
FT /note="PPR 2"
FT REPEAT 113..147
FT /note="PPR 3"
FT REPEAT 148..182
FT /note="PPR 4"
FT REPEAT 183..217
FT /note="PPR 5"
FT REPEAT 218..253
FT /note="PPR 6"
FT REPEAT 254..288
FT /note="PPR 7"
FT REPEAT 289..323
FT /note="PPR 8"
FT REPEAT 324..358
FT /note="PPR 9"
FT REPEAT 359..392
FT /note="PPR 10"
FT REPEAT 393..427
FT /note="PPR 11"
FT REPEAT 428..462
FT /note="PPR 12"
FT REPEAT 463..497
FT /note="PPR 13"
FT REPEAT 498..532
FT /note="PPR 14"
FT REPEAT 533..567
FT /note="PPR 15"
FT REPEAT 568..602
FT /note="PPR 16"
FT REPEAT 603..637
FT /note="PPR 17"
FT REPEAT 638..672
FT /note="PPR 18"
SQ SEQUENCE 687 AA; 77901 MW; 4C2116BC613F5709 CRC64;
MVVFPKSLSP KHVLKLLKSE KNPRAAFALF DSATRHPGYA HSAVVYHHIL RRLSETRMVN
HVSRIVELIR SQECKCDEDV ALSVIKTYGK NSMPDQALDV FKRMREIFGC EPAIRSYNTL
LNAFVEAKQW VKVESLFAYF ETAGVAPNLQ TYNVLIKMSC KKKEFEKARG FLDWMWKEGF
KPDVFSYSTV INDLAKAGKL DDALELFDEM SERGVAPDVT CYNILIDGFL KEKDHKTAME
LWDRLLEDSS VYPNVKTHNI MISGLSKCGR VDDCLKIWER MKQNEREKDL YTYSSLIHGL
CDAGNVDKAE SVFNELDERK ASIDVVTYNT MLGGFCRCGK IKESLELWRI MEHKNSVNIV
SYNILIKGLL ENGKIDEATM IWRLMPAKGY AADKTTYGIF IHGLCVNGYV NKALGVMQEV
ESSGGHLDVY AYASIIDCLC KKKRLEEASN LVKEMSKHGV ELNSHVCNAL IGGLIRDSRL
GEASFFLREM GKNGCRPTVV SYNILICGLC KAGKFGEASA FVKEMLENGW KPDLKTYSIL
LCGLCRDRKI DLALELWHQF LQSGLETDVM MHNILIHGLC SVGKLDDAMT VMANMEHRNC
TANLVTYNTL MEGFFKVGDS NRATVIWGYM YKMGLQPDII SYNTIMKGLC MCRGVSYAME
FFDDARNHGI FPTVYTWNIL VRAVVNR
