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PP225_ARATH
ID   PP225_ARATH             Reviewed;         551 AA.
AC   Q9LK58;
DT   16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2000, sequence version 1.
DT   25-MAY-2022, entry version 109.
DE   RecName: Full=Pentatricopeptide repeat-containing protein At3g13150;
GN   OrderedLocusNames=At3g13150; ORFNames=MJG19.10;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA   Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence
RT   features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC
RT   clones.";
RL   DNA Res. 7:217-221(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RA   Cheuk R.F., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RT   "Arabidopsis ORF clones.";
RL   Submitted (MAY-2005) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   GENE FAMILY.
RX   PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA   Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA   Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA   Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA   Taconnat L., Small I.;
RT   "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT   reveals their essential role in organelle biogenesis.";
RL   Plant Cell 16:2089-2103(2004).
CC   -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC   -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC       URL="https://ppr.plantenergy.uwa.edu.au";
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DR   EMBL; AP000375; BAB01406.1; -; Genomic_DNA.
DR   EMBL; CP002686; AEE75302.1; -; Genomic_DNA.
DR   EMBL; BT023440; AAY56431.1; -; mRNA.
DR   RefSeq; NP_187922.1; NM_112154.4.
DR   AlphaFoldDB; Q9LK58; -.
DR   SMR; Q9LK58; -.
DR   STRING; 3702.AT3G13150.1; -.
DR   PaxDb; Q9LK58; -.
DR   PRIDE; Q9LK58; -.
DR   ProteomicsDB; 249174; -.
DR   EnsemblPlants; AT3G13150.1; AT3G13150.1; AT3G13150.
DR   GeneID; 820503; -.
DR   Gramene; AT3G13150.1; AT3G13150.1; AT3G13150.
DR   KEGG; ath:AT3G13150; -.
DR   Araport; AT3G13150; -.
DR   TAIR; locus:2090014; AT3G13150.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_10_3_1; -.
DR   InParanoid; Q9LK58; -.
DR   OMA; IRIMLLY; -.
DR   OrthoDB; 1344243at2759; -.
DR   PhylomeDB; Q9LK58; -.
DR   PRO; PR:Q9LK58; -.
DR   Proteomes; UP000006548; Chromosome 3.
DR   ExpressionAtlas; Q9LK58; baseline and differential.
DR   Genevisible; Q9LK58; AT.
DR   GO; GO:0003729; F:mRNA binding; IDA:TAIR.
DR   Gene3D; 1.25.40.10; -; 2.
DR   InterPro; IPR002885; Pentatricopeptide_repeat.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   Pfam; PF01535; PPR; 2.
DR   Pfam; PF13041; PPR_2; 2.
DR   TIGRFAMs; TIGR00756; PPR; 5.
DR   PROSITE; PS51375; PPR; 7.
PE   2: Evidence at transcript level;
KW   Reference proteome; Repeat.
FT   CHAIN           1..551
FT                   /note="Pentatricopeptide repeat-containing protein
FT                   At3g13150"
FT                   /id="PRO_0000356084"
FT   REPEAT          121..155
FT                   /note="PPR 1"
FT   REPEAT          156..191
FT                   /note="PPR 2"
FT   REPEAT          192..226
FT                   /note="PPR 3"
FT   REPEAT          227..261
FT                   /note="PPR 4"
FT   REPEAT          262..296
FT                   /note="PPR 5"
FT   REPEAT          297..331
FT                   /note="PPR 6"
FT   REPEAT          332..366
FT                   /note="PPR 7"
FT   REGION          22..67
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          409..435
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          449..551
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        24..62
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   551 AA;  60630 MW;  576CC2F88AAC295A CRC64;
     MSKVGSSLYS RLHGIFKESS IATAKSAKPR SQTKSTKFPS KLKASTASVG DGGQSSNDAK
     DSKNSKLTQK VEKFKRSCES ESFRQVHGLY SAFIRRLREA KKFSTIDEVL QYQKKFDDIK
     SEDFVIRIML LYGYSGMAEH AHKLFDEMPE LNCERTVKSF NALLSAYVNS KKLDEAMKTF
     KELPEKLGIT PDLVTYNTMI KALCRKGSMD DILSIFEELE KNGFEPDLIS FNTLLEEFYR
     RELFVEGDRI WDLMKSKNLS PNIRSYNSRV RGLTRNKKFT DALNLIDVMK TEGISPDVHT
     YNALITAYRV DNNLEEVMKC YNEMKEKGLT PDTVTYCMLI PLLCKKGDLD RAVEVSEEAI
     KHKLLSRPNM YKPVVERLMG AGKIDEATQL VKNGKLQSYF RYLPDLSAGK KKTTSSPVSS
     SAKTTSTPVS SSPDTSSFLL SLSLAADSSS SDSDSSSPDS SSSVSSSPDS SSSVSSSPDS
     YSSFSSSPDS SSSVSSSLFS SSRENSSSPD YSNSVSSSLD YSGSVSSSSD YSSSVFPSAN
     SSSSSSGLLD D
 
 
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