PP230_ARATH
ID PP230_ARATH Reviewed; 405 AA.
AC Q9LUD6;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 104.
DE RecName: Full=Pentatricopeptide repeat-containing protein At3g14580, mitochondrial;
DE Flags: Precursor;
GN OrderedLocusNames=At3g14580; ORFNames=MIE1.8;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10819329; DOI=10.1093/dnares/7.2.131;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence
RT features of the regions of 4,504,864 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:131-135(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Bautista V.R., Kim C.J., Chen H., Wu S.Y., De Los Reyes C., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AB023038; BAB02390.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE75541.1; -; Genomic_DNA.
DR EMBL; BT029779; ABM06049.1; -; mRNA.
DR RefSeq; NP_188076.1; NM_112318.2.
DR AlphaFoldDB; Q9LUD6; -.
DR SMR; Q9LUD6; -.
DR BioGRID; 6018; 2.
DR STRING; 3702.AT3G14580.1; -.
DR PaxDb; Q9LUD6; -.
DR PRIDE; Q9LUD6; -.
DR ProteomicsDB; 249177; -.
DR EnsemblPlants; AT3G14580.1; AT3G14580.1; AT3G14580.
DR GeneID; 820684; -.
DR Gramene; AT3G14580.1; AT3G14580.1; AT3G14580.
DR KEGG; ath:AT3G14580; -.
DR Araport; AT3G14580; -.
DR TAIR; locus:2089581; AT3G14580.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_768571_0_0_1; -.
DR InParanoid; Q9LUD6; -.
DR OMA; ACCLNIL; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9LUD6; -.
DR PRO; PR:Q9LUD6; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LUD6; baseline and differential.
DR Genevisible; Q9LUD6; AT.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR Gene3D; 1.25.40.10; -; 3.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 1.
DR TIGRFAMs; TIGR00756; PPR; 3.
DR PROSITE; PS51375; PPR; 8.
PE 2: Evidence at transcript level;
KW Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT TRANSIT 1..37
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 38..405
FT /note="Pentatricopeptide repeat-containing protein
FT At3g14580, mitochondrial"
FT /id="PRO_0000356089"
FT REPEAT 94..124
FT /note="PPR 1"
FT REPEAT 130..165
FT /note="PPR 2"
FT REPEAT 166..200
FT /note="PPR 3"
FT REPEAT 201..235
FT /note="PPR 4"
FT REPEAT 236..270
FT /note="PPR 5"
FT REPEAT 271..305
FT /note="PPR 6"
FT REPEAT 306..340
FT /note="PPR 7"
FT REPEAT 341..375
FT /note="PPR 8"
FT REGION 13..44
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 405 AA; 46711 MW; C61DD571638E710F CRC64;
MILRRLVLSA TSNSNPRRSQ SLSSSGVRIL SSSSSDRYTS SSQRYSGDDR LARLRHKDWL
APNEVLKIFD NVKDPSFLLP AYQHYSKRKD YQPTESLYAL MINKFGQAKM YDEIEEVMRT
IKLEKRCRFS EEFFYNLMRI YGNLAGRINR AIEILFGMPD FGCWPSSKSF NFILNLLVSA
KLFDEIHKIF VSAPKLGVEI DACCLNILIK GLCESGNLEA ALQLLDEFPQ QKSRPNVMTF
SPLIRGFCNK GKFEEAFKLL ERMEKERIEP DTITFNILIS GLRKKGRVEE GIDLLERMKV
KGCEPNPGTY QEVLYGLLDK KRNLEAKEMM SQMISWGMRP SFLSYKKMVL GLCETKSVVE
MDWVLRQMVN HGFVPKTLMW WKVVQCVVSK NNDDSQANLD RITAC