PP231_ARATH
ID PP231_ARATH Reviewed; 653 AA.
AC Q9LUC2;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 25-MAY-2022, entry version 111.
DE RecName: Full=Pentatricopeptide repeat-containing protein At3g14730;
GN Name=PCMP-E31; OrderedLocusNames=At3g14730; ORFNames=MIE1.23;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10819329; DOI=10.1093/dnares/7.2.131;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence
RT features of the regions of 4,504,864 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:131-135(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=10809006; DOI=10.1023/a:1006352315928;
RA Aubourg S., Boudet N., Kreis M., Lecharny A.;
RT "In Arabidopsis thaliana, 1% of the genome codes for a novel protein family
RT unique to plants.";
RL Plant Mol. Biol. 42:603-613(2000).
RN [4]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-E subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AB023038; BAB02404.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE75560.1; -; Genomic_DNA.
DR RefSeq; NP_188091.1; NM_112334.2.
DR AlphaFoldDB; Q9LUC2; -.
DR SMR; Q9LUC2; -.
DR PaxDb; Q9LUC2; -.
DR PRIDE; Q9LUC2; -.
DR ProteomicsDB; 249178; -.
DR EnsemblPlants; AT3G14730.1; AT3G14730.1; AT3G14730.
DR GeneID; 820701; -.
DR Gramene; AT3G14730.1; AT3G14730.1; AT3G14730.
DR KEGG; ath:AT3G14730; -.
DR Araport; AT3G14730; -.
DR TAIR; locus:2089591; AT3G14730.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_0_1_1; -.
DR InParanoid; Q9LUC2; -.
DR OMA; PVVWRAL; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9LUC2; -.
DR PRO; PR:Q9LUC2; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LUC2; baseline and differential.
DR Genevisible; Q9LUC2; AT.
DR Gene3D; 1.25.40.10; -; 4.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF13041; PPR_2; 2.
DR SUPFAM; SSF48452; SSF48452; 1.
DR TIGRFAMs; TIGR00756; PPR; 5.
DR PROSITE; PS51375; PPR; 13.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat.
FT CHAIN 1..653
FT /note="Pentatricopeptide repeat-containing protein
FT At3g14730"
FT /id="PRO_0000356090"
FT REPEAT 59..93
FT /note="PPR 1"
FT REPEAT 95..119
FT /note="PPR 2"
FT REPEAT 125..159
FT /note="PPR 3"
FT REPEAT 160..193
FT /note="PPR 4"
FT REPEAT 194..224
FT /note="PPR 5"
FT REPEAT 226..260
FT /note="PPR 6"
FT REPEAT 261..295
FT /note="PPR 7"
FT REPEAT 296..326
FT /note="PPR 8"
FT REPEAT 327..361
FT /note="PPR 9"
FT REPEAT 362..396
FT /note="PPR 10"
FT REPEAT 401..431
FT /note="PPR 11"
FT REPEAT 432..466
FT /note="PPR 12"
FT REPEAT 467..497
FT /note="PPR 13"
FT REPEAT 503..537
FT /note="PPR 14"
FT REGION 538..613
FT /note="Type E motif"
FT REGION 614..644
FT /note="Type E(+) motif"
SQ SEQUENCE 653 AA; 72711 MW; 16949FAE2B6DDBF9 CRC64;
MTVSFLRIEI QNCSAGILRF LPRNPDLFAA IKPSSALASL YSTVSGQIEE NPKRYEHHNV
ATCIATLQRC AQRKDYVSGQ QIHGFMVRKG FLDDSPRAGT SLVNMYAKCG LMRRAVLVFG
GSERDVFGYN ALISGFVVNG SPLDAMETYR EMRANGILPD KYTFPSLLKG SDAMELSDVK
KVHGLAFKLG FDSDCYVGSG LVTSYSKFMS VEDAQKVFDE LPDRDDSVLW NALVNGYSQI
FRFEDALLVF SKMREEGVGV SRHTITSVLS AFTVSGDIDN GRSIHGLAVK TGSGSDIVVS
NALIDMYGKS KWLEEANSIF EAMDERDLFT WNSVLCVHDY CGDHDGTLAL FERMLCSGIR
PDIVTLTTVL PTCGRLASLR QGREIHGYMI VSGLLNRKSS NEFIHNSLMD MYVKCGDLRD
ARMVFDSMRV KDSASWNIMI NGYGVQSCGE LALDMFSCMC RAGVKPDEIT FVGLLQACSH
SGFLNEGRNF LAQMETVYNI LPTSDHYACV IDMLGRADKL EEAYELAISK PICDNPVVWR
SILSSCRLHG NKDLALVAGK RLHELEPEHC GGYVLMSNVY VEAGKYEEVL DVRDAMRQQN
VKKTPGCSWI VLKNGVHTFF TGNQTHPEFK SIHDWLSLVI SHMHGHEYMT VDD