PP233_ARATH
ID PP233_ARATH Reviewed; 523 AA.
AC Q9LIL5;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 113.
DE RecName: Full=Putative pentatricopeptide repeat-containing protein At3g15200;
GN OrderedLocusNames=At3g15200; ORFNames=F4B12.11;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence
RT features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC
RT clones.";
RL DNA Res. 7:217-221(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AP001299; BAB02574.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE75631.1; -; Genomic_DNA.
DR RefSeq; NP_188138.1; NM_112383.1.
DR AlphaFoldDB; Q9LIL5; -.
DR SMR; Q9LIL5; -.
DR iPTMnet; Q9LIL5; -.
DR PaxDb; Q9LIL5; -.
DR PRIDE; Q9LIL5; -.
DR ProteomicsDB; 249180; -.
DR EnsemblPlants; AT3G15200.1; AT3G15200.1; AT3G15200.
DR GeneID; 820751; -.
DR Gramene; AT3G15200.1; AT3G15200.1; AT3G15200.
DR KEGG; ath:AT3G15200; -.
DR Araport; AT3G15200; -.
DR TAIR; locus:2083671; AT3G15200.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_20_1; -.
DR InParanoid; Q9LIL5; -.
DR OMA; KGMVPEP; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9LIL5; -.
DR PRO; PR:Q9LIL5; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LIL5; baseline and differential.
DR Genevisible; Q9LIL5; AT.
DR GO; GO:0022626; C:cytosolic ribosome; HDA:TAIR.
DR Gene3D; 1.25.40.10; -; 4.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF13041; PPR_2; 2.
DR SUPFAM; SSF48452; SSF48452; 1.
DR TIGRFAMs; TIGR00756; PPR; 6.
DR PROSITE; PS51375; PPR; 9.
PE 3: Inferred from homology;
KW Reference proteome; Repeat.
FT CHAIN 1..523
FT /note="Putative pentatricopeptide repeat-containing protein
FT At3g15200"
FT /id="PRO_0000356092"
FT REPEAT 142..172
FT /note="PPR 1"
FT REPEAT 177..211
FT /note="PPR 2"
FT REPEAT 212..242
FT /note="PPR 3"
FT REPEAT 246..280
FT /note="PPR 4"
FT REPEAT 281..315
FT /note="PPR 5"
FT REPEAT 316..350
FT /note="PPR 6"
FT REPEAT 351..385
FT /note="PPR 7"
FT REPEAT 388..418
FT /note="PPR 8"
FT REPEAT 420..454
FT /note="PPR 9"
FT REPEAT 455..489
FT /note="PPR 10"
FT REGION 497..523
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 501..523
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 523 AA; 61079 MW; 70CE85A3DF8464CE CRC64;
MGGKNKIEIL FQLQSALSRR RISSLVDFRR VFPPETPNHK NNITLSRFHF LGTHFLHSLG
APDKFPNRFN DDKDKQSALD VHNIIKHHRG SSPEKIKRIL DKCGIDLTEE LVLEVVNRNR
SDWKPAYILS QLVVKQSVHL SSSMLYNEIL DVLGKMRRFE EFHQVFDEMS KRDGFVNEKT
YEVLLNRYAA AHKVDEAVGV FERRKEFGID DDLVAFHGLL MWLCRYKHVE FAETLFCSRR
REFGCDIKAM NMILNGWCVL GNVHEAKRFW KDIIASKCRP DVVSYGTMIN ALTKKGKLGK
AMELYRAMWD TRRNPDVKIC NNVIDALCFK KRIPEALEVF REISEKGPDP NVVTYNSLLK
HLCKIRRTEK VWELVEEMEL KGGSCSPNDV TFSYLLKYSQ RSKDVDIVLE RMAKNKCEMT
SDLYNLMFRL YVQWDKEEKV REIWSEMERS GLGPDQRTYT IRIHGLHTKG KIGEALSYFQ
EMMSKGMVPE PRTEMLLNQN KTKPRVEDKM LRSNLTSEES ESD