PP238_ARATH
ID PP238_ARATH Reviewed; 507 AA.
AC Q9LUR2;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 107.
DE RecName: Full=Putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial;
DE Flags: Precursor;
GN OrderedLocusNames=At3g16710; ORFNames=MGL6.18;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10819329; DOI=10.1093/dnares/7.2.131;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence
RT features of the regions of 4,504,864 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:131-135(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AB022217; BAB02763.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE75855.1; -; Genomic_DNA.
DR RefSeq; NP_188293.2; NM_112544.3.
DR AlphaFoldDB; Q9LUR2; -.
DR SMR; Q9LUR2; -.
DR iPTMnet; Q9LUR2; -.
DR PaxDb; Q9LUR2; -.
DR PRIDE; Q9LUR2; -.
DR EnsemblPlants; AT3G16710.1; AT3G16710.1; AT3G16710.
DR GeneID; 820923; -.
DR Gramene; AT3G16710.1; AT3G16710.1; AT3G16710.
DR KEGG; ath:AT3G16710; -.
DR Araport; AT3G16710; -.
DR TAIR; locus:2089388; AT3G16710.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_0_1; -.
DR InParanoid; Q9LUR2; -.
DR OMA; MVEIGCR; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9LUR2; -.
DR PRO; PR:Q9LUR2; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LUR2; baseline and differential.
DR Genevisible; Q9LUR2; AT.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR Gene3D; 1.25.40.10; -; 6.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 4.
DR Pfam; PF13812; PPR_3; 1.
DR SUPFAM; SSF48452; SSF48452; 1.
DR TIGRFAMs; TIGR00756; PPR; 10.
DR PROSITE; PS51375; PPR; 13.
PE 3: Inferred from homology;
KW Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT TRANSIT 1..48
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 49..507
FT /note="Putative pentatricopeptide repeat-containing protein
FT At3g16710, mitochondrial"
FT /id="PRO_0000356097"
FT REPEAT 47..81
FT /note="PPR 1"
FT REPEAT 82..116
FT /note="PPR 2"
FT REPEAT 117..151
FT /note="PPR 3"
FT REPEAT 152..186
FT /note="PPR 4"
FT REPEAT 187..221
FT /note="PPR 5"
FT REPEAT 222..256
FT /note="PPR 6"
FT REPEAT 257..291
FT /note="PPR 7"
FT REPEAT 292..326
FT /note="PPR 8"
FT REPEAT 327..361
FT /note="PPR 9"
FT REPEAT 362..396
FT /note="PPR 10"
FT REPEAT 397..431
FT /note="PPR 11"
FT REPEAT 432..466
FT /note="PPR 12"
FT REPEAT 467..501
FT /note="PPR 13"
SQ SEQUENCE 507 AA; 57944 MW; BA004B18C7AEF629 CRC64;
MRRSIATGFA SIVKGFHLHS HRHRLQISNP RTAASLSLCG FCFWIRAFSS YRKILRNGLH
NLQFNDALDL FTRMVHSRPL PSIIDFTRLL SVIAKMNRYD VVISLFEQMQ ILGIPPLLCT
CNIVMHCVCL SSQPCRASCF LGKMMKLGFE PDLVTFTSLL NGYCHWNRIE DAIALFDQIL
GMGFKPNVVT YTTLIRCLCK NRHLNHAVEL FNQMGTNGSR PNVVTYNALV TGLCEIGRWG
DAAWLLRDMM KRRIEPNVIT FTALIDAFVK VGKLMEAKEL YNVMIQMSVY PDVFTYGSLI
NGLCMYGLLD EARQMFYLME RNGCYPNEVI YTTLIHGFCK SKRVEDGMKI FYEMSQKGVV
ANTITYTVLI QGYCLVGRPD VAQEVFNQMS SRRAPPDIRT YNVLLDGLCC NGKVEKALMI
FEYMRKREMD INIVTYTIII QGMCKLGKVE DAFDLFCSLF SKGMKPNVIT YTTMISGFCR
RGLIHEADSL FKKMKEDGFL PNESVYK