ID   PP246_ARATH             Reviewed;         820 AA.
AC   Q9LIE7;
DT   16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2000, sequence version 1.
DT   03-AUG-2022, entry version 114.
DE   RecName: Full=Pentatricopeptide repeat-containing protein At3g22150, chloroplastic;
DE   Flags: Precursor;
GN   Name=PCMP-E95; OrderedLocusNames=At3g22150; ORFNames=MKA23.11;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA   Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence
RT   features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC
RT   clones.";
RL   DNA Res. 7:217-221(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA   Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA   Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA   Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA   Shinozaki K.;
RT   "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL   Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   GENE FAMILY.
RX   PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA   Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA   Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA   Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA   Taconnat L., Small I.;
RT   "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT   reveals their essential role in organelle biogenesis.";
RL   Plant Cell 16:2089-2103(2004).
CC   -!- SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the PPR family. PCMP-E subfamily. {ECO:0000305}.
CC   -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC       URL="https://ppr.plantenergy.uwa.edu.au";
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DR   EMBL; AP001306; BAB03063.1; -; Genomic_DNA.
DR   EMBL; CP002686; AEE76594.1; -; Genomic_DNA.
DR   EMBL; CP002686; ANM64477.1; -; Genomic_DNA.
DR   EMBL; AK229803; BAF01634.1; -; mRNA.
DR   RefSeq; NP_001326502.1; NM_001338570.1.
DR   RefSeq; NP_188854.1; NM_113112.4.
DR   AlphaFoldDB; Q9LIE7; -.
DR   SMR; Q9LIE7; -.
DR   STRING; 3702.AT3G22150.1; -.
DR   PaxDb; Q9LIE7; -.
DR   PRIDE; Q9LIE7; -.
DR   ProteomicsDB; 249096; -.
DR   EnsemblPlants; AT3G22150.1; AT3G22150.1; AT3G22150.
DR   EnsemblPlants; AT3G22150.2; AT3G22150.2; AT3G22150.
DR   GeneID; 821779; -.
DR   Gramene; AT3G22150.1; AT3G22150.1; AT3G22150.
DR   Gramene; AT3G22150.2; AT3G22150.2; AT3G22150.
DR   KEGG; ath:AT3G22150; -.
DR   Araport; AT3G22150; -.
DR   TAIR; locus:2090444; AT3G22150.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_15_6_1; -.
DR   InParanoid; Q9LIE7; -.
DR   OMA; QHGMGER; -.
DR   OrthoDB; 1344243at2759; -.
DR   PhylomeDB; Q9LIE7; -.
DR   PRO; PR:Q9LIE7; -.
DR   Proteomes; UP000006548; Chromosome 3.
DR   ExpressionAtlas; Q9LIE7; baseline and differential.
DR   Genevisible; Q9LIE7; AT.
DR   GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR   GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR   GO; GO:0005739; C:mitochondrion; IBA:GO_Central.
DR   GO; GO:0009536; C:plastid; IDA:TAIR.
DR   GO; GO:0003729; F:mRNA binding; IDA:TAIR.
DR   GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR   GO; GO:1900865; P:chloroplast RNA modification; IMP:TAIR.
DR   GO; GO:0080156; P:mitochondrial mRNA modification; IMP:TAIR.
DR   GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR   Gene3D; 1.25.40.10; -; 6.
DR   InterPro; IPR002885; Pentatricopeptide_repeat.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   Pfam; PF01535; PPR; 2.
DR   Pfam; PF13041; PPR_2; 4.
DR   TIGRFAMs; TIGR00756; PPR; 4.
DR   PROSITE; PS51375; PPR; 13.
PE   2: Evidence at transcript level;
KW   Chloroplast; Plastid; Reference proteome; Repeat; Transit peptide.
FT   TRANSIT         1..50
FT                   /note="Chloroplast"
FT                   /evidence="ECO:0000255"
FT   CHAIN           51..820
FT                   /note="Pentatricopeptide repeat-containing protein
FT                   At3g22150, chloroplastic"
FT                   /id="PRO_0000356105"
FT   REPEAT          69..99
FT                   /note="PPR 1"
FT   REPEAT          106..136
FT                   /note="PPR 2"
FT   REPEAT          141..177
FT                   /note="PPR 3"
FT   REPEAT          178..212
FT                   /note="PPR 4"
FT   REPEAT          213..247
FT                   /note="PPR 5"
FT   REPEAT          250..284
FT                   /note="PPR 6"
FT   REPEAT          285..316
FT                   /note="PPR 7"
FT   REPEAT          317..347
FT                   /note="PPR 8"
FT   REPEAT          352..382
FT                   /note="PPR 9"
FT   REPEAT          383..417
FT                   /note="PPR 10"
FT   REPEAT          418..452
FT                   /note="PPR 11"
FT   REPEAT          485..519
FT                   /note="PPR 12"
FT   REPEAT          520..550
FT                   /note="PPR 13"
FT   REPEAT          555..585
FT                   /note="PPR 14"
FT   REPEAT          586..620
FT                   /note="PPR 15"
FT   REPEAT          621..651
FT                   /note="PPR 16"
FT   REPEAT          657..691
FT                   /note="PPR 17"
FT   REGION          1..42
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          693..770
FT                   /note="Type E motif"
FT   REGION          771..801
FT                   /note="Type E(+) motif"
FT   COMPBIAS        1..17
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        18..42
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   820 AA;  91850 MW;  3702D06B9E5ABF8D CRC64;
     MAGSALPLPP PPPLSLQSPS QNQTRHSSTF SPPTLTPQTP SIRSRLSKIC QDGNPQLARQ
     LFDAIPKPTT VLWNTIIIGF ICNNLPHEAL LFYSRMKKTA PFTNCDAYTY SSTLKACAET
     KNLKAGKAVH CHLIRCLQNS SRVVHNSLMN MYVSCLNAPD CFEYDVVRKV FDNMRRKNVV
     AWNTLISWYV KTGRNAEACR QFGIMMRMEV KPSPVSFVNV FPAVSISRSI KKANVFYGLM
     LKLGDEYVKD LFVVSSAISM YAELGDIESS RRVFDSCVER NIEVWNTMIG VYVQNDCLVE
     SIELFLEAIG SKEIVSDEVT YLLAASAVSA LQQVELGRQF HGFVSKNFRE LPIVIVNSLM
     VMYSRCGSVH KSFGVFLSMR ERDVVSWNTM ISAFVQNGLD DEGLMLVYEM QKQGFKIDYI
     TVTALLSAAS NLRNKEIGKQ THAFLIRQGI QFEGMNSYLI DMYSKSGLIR ISQKLFEGSG
     YAERDQATWN SMISGYTQNG HTEKTFLVFR KMLEQNIRPN AVTVASILPA CSQIGSVDLG
     KQLHGFSIRQ YLDQNVFVAS ALVDMYSKAG AIKYAEDMFS QTKERNSVTY TTMILGYGQH
     GMGERAISLF LSMQESGIKP DAITFVAVLS ACSYSGLIDE GLKIFEEMRE VYNIQPSSEH
     YCCITDMLGR VGRVNEAYEF VKGLGEEGNI AELWGSLLGS CKLHGELELA ETVSERLAKF
     DKGKNFSGYE VLLSNMYAEE QKWKSVDKVR RGMREKGLKK EVGRSGIEIA GYVNCFVSRD
     QEHPHSSEIY DVIDGLAKDM RGDSFLTTLP TVTPSLELDE