PP248_ARATH
ID PP248_ARATH Reviewed; 562 AA.
AC Q9LUJ4;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 25-MAY-2022, entry version 108.
DE RecName: Full=Pentatricopeptide repeat-containing protein At3g22670, mitochondrial;
DE Flags: Precursor;
GN OrderedLocusNames=At3g22670; ORFNames=MWI23.4;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10819329; DOI=10.1093/dnares/7.2.131;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence
RT features of the regions of 4,504,864 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:131-135(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AB022223; BAB01242.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE76663.1; -; Genomic_DNA.
DR RefSeq; NP_188906.1; NM_113166.2.
DR AlphaFoldDB; Q9LUJ4; -.
DR SMR; Q9LUJ4; -.
DR STRING; 3702.AT3G22670.1; -.
DR PaxDb; Q9LUJ4; -.
DR PRIDE; Q9LUJ4; -.
DR ProteomicsDB; 249098; -.
DR EnsemblPlants; AT3G22670.1; AT3G22670.1; AT3G22670.
DR GeneID; 821838; -.
DR Gramene; AT3G22670.1; AT3G22670.1; AT3G22670.
DR KEGG; ath:AT3G22670; -.
DR Araport; AT3G22670; -.
DR TAIR; locus:2094394; AT3G22670.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_20_1; -.
DR InParanoid; Q9LUJ4; -.
DR OMA; FIEAYCH; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9LUJ4; -.
DR PRO; PR:Q9LUJ4; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LUJ4; differential.
DR Genevisible; Q9LUJ4; AT.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR Gene3D; 1.25.40.10; -; 4.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 3.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 1.
DR Pfam; PF13812; PPR_3; 1.
DR TIGRFAMs; TIGR00756; PPR; 8.
DR PROSITE; PS51375; PPR; 10.
PE 2: Evidence at transcript level;
KW Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT TRANSIT 1..31
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 32..562
FT /note="Pentatricopeptide repeat-containing protein
FT At3g22670, mitochondrial"
FT /id="PRO_0000356107"
FT REPEAT 165..199
FT /note="PPR 1"
FT REPEAT 202..232
FT /note="PPR 2"
FT REPEAT 238..268
FT /note="PPR 3"
FT REPEAT 272..306
FT /note="PPR 4"
FT REPEAT 307..341
FT /note="PPR 5"
FT REPEAT 342..376
FT /note="PPR 6"
FT REPEAT 377..411
FT /note="PPR 7"
FT REPEAT 412..446
FT /note="PPR 8"
FT REPEAT 450..484
FT /note="PPR 9"
FT REPEAT 485..519
FT /note="PPR 10"
SQ SEQUENCE 562 AA; 64010 MW; AE1E3F9BD4746412 CRC64;
MLTKLRISKL VSYTLPRRIF QRRFLVTNNT AEESPIVAAE SPELPSWIKD FLSNKPSSSS
SSVSKDDEDF VIPSLANWVE SQKFSRQQVS EGNVVKKPVE DIDKVCDFLN KKDTSHEDVV
KELSKCDVVV TESLVLQVLR RFSNGWNQAY GFFIWANSQT GYVHSGHTYN AMVDVLGKCR
NFDLMWELVN EMNKNEESKL VTLDTMSKVM RRLAKSGKYN KAVDAFLEME KSYGVKTDTI
AMNSLMDALV KENSIEHAHE VFLKLFDTIK PDARTFNILI HGFCKARKFD DARAMMDLMK
VTEFTPDVVT YTSFVEAYCK EGDFRRVNEM LEEMRENGCN PNVVTYTIVM HSLGKSKQVA
EALGVYEKMK EDGCVPDAKF YSSLIHILSK TGRFKDAAEI FEDMTNQGVR RDVLVYNTMI
SAALHHSRDE MALRLLKRME DEEGESCSPN VETYAPLLKM CCHKKKMKLL GILLHHMVKN
DVSIDVSTYI LLIRGLCMSG KVEEACLFFE EAVRKGMVPR DSTCKMLVDE LEKKNMAEAK
LKIQSLVQSK TMIDSHSPLS VS