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PP248_ARATH
ID   PP248_ARATH             Reviewed;         562 AA.
AC   Q9LUJ4;
DT   16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2000, sequence version 1.
DT   25-MAY-2022, entry version 108.
DE   RecName: Full=Pentatricopeptide repeat-containing protein At3g22670, mitochondrial;
DE   Flags: Precursor;
GN   OrderedLocusNames=At3g22670; ORFNames=MWI23.4;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10819329; DOI=10.1093/dnares/7.2.131;
RA   Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence
RT   features of the regions of 4,504,864 bp covered by sixty P1 and TAC
RT   clones.";
RL   DNA Res. 7:131-135(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   GENE FAMILY.
RX   PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA   Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA   Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA   Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA   Taconnat L., Small I.;
RT   "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT   reveals their essential role in organelle biogenesis.";
RL   Plant Cell 16:2089-2103(2004).
CC   -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC   -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC       URL="https://ppr.plantenergy.uwa.edu.au";
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DR   EMBL; AB022223; BAB01242.1; -; Genomic_DNA.
DR   EMBL; CP002686; AEE76663.1; -; Genomic_DNA.
DR   RefSeq; NP_188906.1; NM_113166.2.
DR   AlphaFoldDB; Q9LUJ4; -.
DR   SMR; Q9LUJ4; -.
DR   STRING; 3702.AT3G22670.1; -.
DR   PaxDb; Q9LUJ4; -.
DR   PRIDE; Q9LUJ4; -.
DR   ProteomicsDB; 249098; -.
DR   EnsemblPlants; AT3G22670.1; AT3G22670.1; AT3G22670.
DR   GeneID; 821838; -.
DR   Gramene; AT3G22670.1; AT3G22670.1; AT3G22670.
DR   KEGG; ath:AT3G22670; -.
DR   Araport; AT3G22670; -.
DR   TAIR; locus:2094394; AT3G22670.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_49_20_1; -.
DR   InParanoid; Q9LUJ4; -.
DR   OMA; FIEAYCH; -.
DR   OrthoDB; 1344243at2759; -.
DR   PhylomeDB; Q9LUJ4; -.
DR   PRO; PR:Q9LUJ4; -.
DR   Proteomes; UP000006548; Chromosome 3.
DR   ExpressionAtlas; Q9LUJ4; differential.
DR   Genevisible; Q9LUJ4; AT.
DR   GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR   Gene3D; 1.25.40.10; -; 4.
DR   InterPro; IPR002885; Pentatricopeptide_repeat.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   Pfam; PF01535; PPR; 3.
DR   Pfam; PF12854; PPR_1; 2.
DR   Pfam; PF13041; PPR_2; 1.
DR   Pfam; PF13812; PPR_3; 1.
DR   TIGRFAMs; TIGR00756; PPR; 8.
DR   PROSITE; PS51375; PPR; 10.
PE   2: Evidence at transcript level;
KW   Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT   TRANSIT         1..31
FT                   /note="Mitochondrion"
FT                   /evidence="ECO:0000255"
FT   CHAIN           32..562
FT                   /note="Pentatricopeptide repeat-containing protein
FT                   At3g22670, mitochondrial"
FT                   /id="PRO_0000356107"
FT   REPEAT          165..199
FT                   /note="PPR 1"
FT   REPEAT          202..232
FT                   /note="PPR 2"
FT   REPEAT          238..268
FT                   /note="PPR 3"
FT   REPEAT          272..306
FT                   /note="PPR 4"
FT   REPEAT          307..341
FT                   /note="PPR 5"
FT   REPEAT          342..376
FT                   /note="PPR 6"
FT   REPEAT          377..411
FT                   /note="PPR 7"
FT   REPEAT          412..446
FT                   /note="PPR 8"
FT   REPEAT          450..484
FT                   /note="PPR 9"
FT   REPEAT          485..519
FT                   /note="PPR 10"
SQ   SEQUENCE   562 AA;  64010 MW;  AE1E3F9BD4746412 CRC64;
     MLTKLRISKL VSYTLPRRIF QRRFLVTNNT AEESPIVAAE SPELPSWIKD FLSNKPSSSS
     SSVSKDDEDF VIPSLANWVE SQKFSRQQVS EGNVVKKPVE DIDKVCDFLN KKDTSHEDVV
     KELSKCDVVV TESLVLQVLR RFSNGWNQAY GFFIWANSQT GYVHSGHTYN AMVDVLGKCR
     NFDLMWELVN EMNKNEESKL VTLDTMSKVM RRLAKSGKYN KAVDAFLEME KSYGVKTDTI
     AMNSLMDALV KENSIEHAHE VFLKLFDTIK PDARTFNILI HGFCKARKFD DARAMMDLMK
     VTEFTPDVVT YTSFVEAYCK EGDFRRVNEM LEEMRENGCN PNVVTYTIVM HSLGKSKQVA
     EALGVYEKMK EDGCVPDAKF YSSLIHILSK TGRFKDAAEI FEDMTNQGVR RDVLVYNTMI
     SAALHHSRDE MALRLLKRME DEEGESCSPN VETYAPLLKM CCHKKKMKLL GILLHHMVKN
     DVSIDVSTYI LLIRGLCMSG KVEEACLFFE EAVRKGMVPR DSTCKMLVDE LEKKNMAEAK
     LKIQSLVQSK TMIDSHSPLS VS
 
 
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