ID   PP252_ARATH             Reviewed;         633 AA.
AC   Q9LIQ7; F4J5C2;
DT   16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2000, sequence version 1.
DT   03-AUG-2022, entry version 113.
DE   RecName: Full=Pentatricopeptide repeat-containing protein At3g24000, mitochondrial;
DE   Flags: Precursor;
GN   Name=PCMP-H87; OrderedLocusNames=At3g24000; ORFNames=F14O13.19;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA   Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence
RT   features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC
RT   clones.";
RL   DNA Res. 7:217-221(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   GENE FAMILY.
RX   PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA   Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA   Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA   Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA   Taconnat L., Small I.;
RT   "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT   reveals their essential role in organelle biogenesis.";
RL   Plant Cell 16:2089-2103(2004).
CC   -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily. {ECO:0000305}.
CC   -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC       URL="https://ppr.plantenergy.uwa.edu.au";
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DR   EMBL; AP001297; BAB03018.1; -; Genomic_DNA.
DR   EMBL; CP002686; AEE76843.2; -; Genomic_DNA.
DR   RefSeq; NP_001319627.1; NM_001338664.1.
DR   AlphaFoldDB; Q9LIQ7; -.
DR   SMR; Q9LIQ7; -.
DR   STRING; 3702.AT3G24000.1; -.
DR   iPTMnet; Q9LIQ7; -.
DR   PaxDb; Q9LIQ7; -.
DR   PRIDE; Q9LIQ7; -.
DR   ProteomicsDB; 249188; -.
DR   EnsemblPlants; AT3G24000.1; AT3G24000.1; AT3G24000.
DR   GeneID; 821984; -.
DR   Gramene; AT3G24000.1; AT3G24000.1; AT3G24000.
DR   KEGG; ath:AT3G24000; -.
DR   Araport; AT3G24000; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_15_1_1; -.
DR   InParanoid; Q9LIQ7; -.
DR   OMA; IENSVHM; -.
DR   OrthoDB; 1344243at2759; -.
DR   PhylomeDB; Q9LIQ7; -.
DR   PRO; PR:Q9LIQ7; -.
DR   Proteomes; UP000006548; Chromosome 3.
DR   ExpressionAtlas; Q9LIQ7; baseline and differential.
DR   Genevisible; Q9LIQ7; AT.
DR   GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   Gene3D; 1.25.40.10; -; 3.
DR   InterPro; IPR032867; DYW_dom.
DR   InterPro; IPR002885; Pentatricopeptide_repeat.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   Pfam; PF14432; DYW_deaminase; 1.
DR   Pfam; PF01535; PPR; 2.
DR   Pfam; PF13041; PPR_2; 3.
DR   SUPFAM; SSF48452; SSF48452; 1.
DR   TIGRFAMs; TIGR00756; PPR; 6.
DR   PROSITE; PS51375; PPR; 10.
PE   3: Inferred from homology;
KW   Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT   TRANSIT         1..63
FT                   /note="Mitochondrion"
FT                   /evidence="ECO:0000255"
FT   CHAIN           64..633
FT                   /note="Pentatricopeptide repeat-containing protein
FT                   At3g24000, mitochondrial"
FT                   /id="PRO_0000356111"
FT   REPEAT          94..124
FT                   /note="PPR 1"
FT   REPEAT          125..159
FT                   /note="PPR 2"
FT   REPEAT          160..194
FT                   /note="PPR 3"
FT   REPEAT          195..225
FT                   /note="PPR 4"
FT   REPEAT          226..260
FT                   /note="PPR 5"
FT   REPEAT          261..295
FT                   /note="PPR 6"
FT   REPEAT          296..326
FT                   /note="PPR 7"
FT   REPEAT          327..361
FT                   /note="PPR 8"
FT   REPEAT          362..396
FT                   /note="PPR 9"
FT   REPEAT          397..431
FT                   /note="PPR 10"
FT   REGION          432..507
FT                   /note="Type E motif"
FT   REGION          508..538
FT                   /note="Type E(+) motif"
FT   REGION          539..633
FT                   /note="Type DYW motif"
SQ   SEQUENCE   633 AA;  71932 MW;  CC6CA8B13E1A20E9 CRC64;
     MALRFPPRLL SQLKLSRRLN SLPAPVSEDS EDESLKFPSN DLLLRTSSND LEGSYIPADR
     RFYNTLLKKC TVFKLLIQGR IVHAHILQSI FRHDIVMGNT LLNMYAKCGS LEEARKVFEK
     MPQRDFVTWT TLISGYSQHD RPCDALLFFN QMLRFGYSPN EFTLSSVIKA AAAERRGCCG
     HQLHGFCVKC GFDSNVHVGS ALLDLYTRYG LMDDAQLVFD ALESRNDVSW NALIAGHARR
     SGTEKALELF QGMLRDGFRP SHFSYASLFG ACSSTGFLEQ GKWVHAYMIK SGEKLVAFAG
     NTLLDMYAKS GSIHDARKIF DRLAKRDVVS WNSLLTAYAQ HGFGKEAVWW FEEMRRVGIR
     PNEISFLSVL TACSHSGLLD EGWHYYELMK KDGIVPEAWH YVTVVDLLGR AGDLNRALRF
     IEEMPIEPTA AIWKALLNAC RMHKNTELGA YAAEHVFELD PDDPGPHVIL YNIYASGGRW
     NDAARVRKKM KESGVKKEPA CSWVEIENAI HMFVANDERH PQREEIARKW EEVLAKIKEL
     GYVPDTSHVI VHVDQQEREV NLQYHSEKIA LAFALLNTPP GSTIHIKKNI RVCGDCHTAI
     KLASKVVGRE IIVRDTNRFH HFKDGNCSCK DYW