ID   PP253_ARATH             Reviewed;         601 AA.
AC   Q9LJR6;
DT   16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2000, sequence version 1.
DT   03-AUG-2022, entry version 111.
DE   RecName: Full=Putative pentatricopeptide repeat-containing protein At3g25060, mitochondrial;
DE   Flags: Precursor;
GN   Name=PCMP-E96; OrderedLocusNames=At3g25060; ORFNames=K3G3.8;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA   Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence
RT   features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC
RT   clones.";
RL   DNA Res. 7:217-221(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   GENE FAMILY.
RX   PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA   Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA   Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA   Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA   Taconnat L., Small I.;
RT   "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT   reveals their essential role in organelle biogenesis.";
RL   Plant Cell 16:2089-2103(2004).
CC   -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the PPR family. PCMP-E subfamily. {ECO:0000305}.
CC   -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC       URL="https://ppr.plantenergy.uwa.edu.au";
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DR   EMBL; AP000412; BAB01891.1; -; Genomic_DNA.
DR   EMBL; CP002686; AEE76973.1; -; Genomic_DNA.
DR   RefSeq; NP_189142.1; NM_113410.2.
DR   AlphaFoldDB; Q9LJR6; -.
DR   SMR; Q9LJR6; -.
DR   STRING; 3702.AT3G25060.1; -.
DR   PaxDb; Q9LJR6; -.
DR   PRIDE; Q9LJR6; -.
DR   ProteomicsDB; 249101; -.
DR   EnsemblPlants; AT3G25060.1; AT3G25060.1; AT3G25060.
DR   GeneID; 822097; -.
DR   Gramene; AT3G25060.1; AT3G25060.1; AT3G25060.
DR   KEGG; ath:AT3G25060; -.
DR   Araport; AT3G25060; -.
DR   TAIR; locus:2086964; AT3G25060.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_0_1_1; -.
DR   InParanoid; Q9LJR6; -.
DR   OMA; STHGCIT; -.
DR   OrthoDB; 1344243at2759; -.
DR   PhylomeDB; Q9LJR6; -.
DR   PRO; PR:Q9LJR6; -.
DR   Proteomes; UP000006548; Chromosome 3.
DR   ExpressionAtlas; Q9LJR6; baseline and differential.
DR   Genevisible; Q9LJR6; AT.
DR   GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR   GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR   GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR   GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR   Gene3D; 1.25.40.10; -; 4.
DR   InterPro; IPR002885; Pentatricopeptide_repeat.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   Pfam; PF01535; PPR; 5.
DR   Pfam; PF13041; PPR_2; 2.
DR   TIGRFAMs; TIGR00756; PPR; 5.
DR   PROSITE; PS51375; PPR; 13.
PE   3: Inferred from homology;
KW   Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT   TRANSIT         1..80
FT                   /note="Mitochondrion"
FT                   /evidence="ECO:0000255"
FT   CHAIN           81..601
FT                   /note="Putative pentatricopeptide repeat-containing protein
FT                   At3g25060, mitochondrial"
FT                   /id="PRO_0000356112"
FT   REPEAT          49..79
FT                   /note="PPR 1"
FT   REPEAT          80..114
FT                   /note="PPR 2"
FT   REPEAT          115..149
FT                   /note="PPR 3"
FT   REPEAT          150..180
FT                   /note="PPR 4"
FT   REPEAT          181..215
FT                   /note="PPR 5"
FT   REPEAT          216..250
FT                   /note="PPR 6"
FT   REPEAT          251..281
FT                   /note="PPR 7"
FT   REPEAT          282..316
FT                   /note="PPR 8"
FT   REPEAT          317..347
FT                   /note="PPR 9"
FT   REPEAT          351..381
FT                   /note="PPR 10"
FT   REPEAT          382..416
FT                   /note="PPR 11"
FT   REPEAT          417..452
FT                   /note="PPR 12"
FT   REPEAT          453..487
FT                   /note="PPR 13"
FT   REGION          488..563
FT                   /note="Type E motif"
FT   REGION          564..594
FT                   /note="Type E(+) motif"
SQ   SEQUENCE   601 AA;  67057 MW;  696B4FD31B3D866A CRC64;
     MVQTKHFCML HRTLLCPKRI KFLQSISKLK RHITQIHAFV ISTGNLLNGS SISRDLIASC
     GRIGEISYAR KVFDELPQRG VSVYNSMIVV YSRGKNPDEV LRLYDQMIAE KIQPDSSTFT
     MTIKACLSGL VLEKGEAVWC KAVDFGYKND VFVCSSVLNL YMKCGKMDEA EVLFGKMAKR
     DVICWTTMVT GFAQAGKSLK AVEFYREMQN EGFGRDRVVM LGLLQASGDL GDTKMGRSVH
     GYLYRTGLPM NVVVETSLVD MYAKVGFIEV ASRVFSRMMF KTAVSWGSLI SGFAQNGLAN
     KAFEAVVEMQ SLGFQPDLVT LVGVLVACSQ VGSLKTGRLV HCYILKRHVL DRVTATALMD
     MYSKCGALSS SREIFEHVGR KDLVCWNTMI SCYGIHGNGQ EVVSLFLKMT ESNIEPDHAT
     FASLLSALSH SGLVEQGQHW FSVMINKYKI QPSEKHYVCL IDLLARAGRV EEALDMINSE
     KLDNALPIWV ALLSGCINHR NLSVGDIAAN KILQLNPDSI GIQTLVSNFF ATANKWKEVA
     KVRKLMRNGA MEKVPGYSAI EVNGELRTFL MEDLSHHEHY HMLQVLRNLK TEIRDVCSGV
     E