ID   PP261_ARATH             Reviewed;         600 AA.
AC   Q9LS72;
DT   16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2000, sequence version 1.
DT   25-MAY-2022, entry version 108.
DE   RecName: Full=Pentatricopeptide repeat-containing protein At3g29230;
GN   Name=PCMP-E27; OrderedLocusNames=At3g29230; ORFNames=MXO21.8;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10819329; DOI=10.1093/dnares/7.2.131;
RA   Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence
RT   features of the regions of 4,504,864 bp covered by sixty P1 and TAC
RT   clones.";
RL   DNA Res. 7:131-135(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   GENE FAMILY.
RX   PubMed=10809006; DOI=10.1023/a:1006352315928;
RA   Aubourg S., Boudet N., Kreis M., Lecharny A.;
RT   "In Arabidopsis thaliana, 1% of the genome codes for a novel protein family
RT   unique to plants.";
RL   Plant Mol. Biol. 42:603-613(2000).
RN   [4]
RP   GENE FAMILY.
RX   PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA   Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA   Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA   Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA   Taconnat L., Small I.;
RT   "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT   reveals their essential role in organelle biogenesis.";
RL   Plant Cell 16:2089-2103(2004).
CC   -!- SIMILARITY: Belongs to the PPR family. PCMP-E subfamily. {ECO:0000305}.
CC   -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC       URL="https://ppr.plantenergy.uwa.edu.au";
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AB026657; BAB01819.1; -; Genomic_DNA.
DR   EMBL; CP002686; AEE77553.1; -; Genomic_DNA.
DR   RefSeq; NP_189568.1; NM_113847.2.
DR   AlphaFoldDB; Q9LS72; -.
DR   SMR; Q9LS72; -.
DR   STRING; 3702.AT3G29230.1; -.
DR   iPTMnet; Q9LS72; -.
DR   PaxDb; Q9LS72; -.
DR   PRIDE; Q9LS72; -.
DR   ProteomicsDB; 249191; -.
DR   EnsemblPlants; AT3G29230.1; AT3G29230.1; AT3G29230.
DR   GeneID; 822578; -.
DR   Gramene; AT3G29230.1; AT3G29230.1; AT3G29230.
DR   KEGG; ath:AT3G29230; -.
DR   Araport; AT3G29230; -.
DR   TAIR; locus:2094812; AT3G29230.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_0_6_1; -.
DR   InParanoid; Q9LS72; -.
DR   OMA; GKLFAQM; -.
DR   OrthoDB; 1344243at2759; -.
DR   PhylomeDB; Q9LS72; -.
DR   PRO; PR:Q9LS72; -.
DR   Proteomes; UP000006548; Chromosome 3.
DR   ExpressionAtlas; Q9LS72; baseline and differential.
DR   Genevisible; Q9LS72; AT.
DR   GO; GO:0003729; F:mRNA binding; IDA:TAIR.
DR   Gene3D; 1.25.40.10; -; 5.
DR   InterPro; IPR002885; Pentatricopeptide_repeat.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   Pfam; PF01535; PPR; 4.
DR   Pfam; PF13041; PPR_2; 3.
DR   TIGRFAMs; TIGR00756; PPR; 7.
DR   PROSITE; PS51375; PPR; 14.
PE   2: Evidence at transcript level;
KW   Reference proteome; Repeat.
FT   CHAIN           1..600
FT                   /note="Pentatricopeptide repeat-containing protein
FT                   At3g29230"
FT                   /id="PRO_0000356120"
FT   REPEAT          50..80
FT                   /note="PPR 1"
FT   REPEAT          81..115
FT                   /note="PPR 2"
FT   REPEAT          116..150
FT                   /note="PPR 3"
FT   REPEAT          151..183
FT                   /note="PPR 4"
FT   REPEAT          184..218
FT                   /note="PPR 5"
FT   REPEAT          219..245
FT                   /note="PPR 6"
FT   REPEAT          246..276
FT                   /note="PPR 7"
FT   REPEAT          279..313
FT                   /note="PPR 8"
FT   REPEAT          314..348
FT                   /note="PPR 9"
FT   REPEAT          349..379
FT                   /note="PPR 10"
FT   REPEAT          380..414
FT                   /note="PPR 11"
FT   REPEAT          415..445
FT                   /note="PPR 12"
FT   REPEAT          451..481
FT                   /note="PPR 13"
FT   REGION          486..561
FT                   /note="Type E motif"
FT   REGION          562..592
FT                   /note="Type E(+) motif"
SQ   SEQUENCE   600 AA;  67338 MW;  A78D9C89BE2560D2 CRC64;
     MTSSLPVRAP SWVSSRRIFE ERLQDLPKCA NLNQVKQLHA QIIRRNLHED LHIAPKLISA
     LSLCRQTNLA VRVFNQVQEP NVHLCNSLIR AHAQNSQPYQ AFFVFSEMQR FGLFADNFTY
     PFLLKACSGQ SWLPVVKMMH NHIEKLGLSS DIYVPNALID CYSRCGGLGV RDAMKLFEKM
     SERDTVSWNS MLGGLVKAGE LRDARRLFDE MPQRDLISWN TMLDGYARCR EMSKAFELFE
     KMPERNTVSW STMVMGYSKA GDMEMARVMF DKMPLPAKNV VTWTIIIAGY AEKGLLKEAD
     RLVDQMVASG LKFDAAAVIS ILAACTESGL LSLGMRIHSI LKRSNLGSNA YVLNALLDMY
     AKCGNLKKAF DVFNDIPKKD LVSWNTMLHG LGVHGHGKEA IELFSRMRRE GIRPDKVTFI
     AVLCSCNHAG LIDEGIDYFY SMEKVYDLVP QVEHYGCLVD LLGRVGRLKE AIKVVQTMPM
     EPNVVIWGAL LGACRMHNEV DIAKEVLDNL VKLDPCDPGN YSLLSNIYAA AEDWEGVADI
     RSKMKSMGVE KPSGASSVEL EDGIHEFTVF DKSHPKSDQI YQMLGSLIEP PDPGELVAVR