PP270_ARATH
ID PP270_ARATH Reviewed; 659 AA.
AC Q9M302;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 106.
DE RecName: Full=Pentatricopeptide repeat-containing protein At3g48810;
GN OrderedLocusNames=At3g48810; ORFNames=T21J18_80;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AL132963; CAB87909.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE78458.1; -; Genomic_DNA.
DR PIR; T49277; T49277.
DR RefSeq; NP_190450.1; NM_114740.3.
DR AlphaFoldDB; Q9M302; -.
DR SMR; Q9M302; -.
DR PaxDb; Q9M302; -.
DR PRIDE; Q9M302; -.
DR EnsemblPlants; AT3G48810.1; AT3G48810.1; AT3G48810.
DR GeneID; 824042; -.
DR Gramene; AT3G48810.1; AT3G48810.1; AT3G48810.
DR KEGG; ath:AT3G48810; -.
DR Araport; AT3G48810; -.
DR TAIR; locus:2099458; AT3G48810.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_8_1; -.
DR InParanoid; Q9M302; -.
DR OMA; ENRFQMI; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9M302; -.
DR PRO; PR:Q9M302; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9M302; baseline and differential.
DR Genevisible; Q9M302; AT.
DR GO; GO:0005739; C:mitochondrion; IDA:TAIR.
DR GO; GO:0000963; P:mitochondrial RNA processing; IMP:TAIR.
DR GO; GO:0008380; P:RNA splicing; IMP:TAIR.
DR Gene3D; 1.25.40.10; -; 6.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 6.
DR Pfam; PF13812; PPR_3; 1.
DR TIGRFAMs; TIGR00756; PPR; 10.
DR PROSITE; PS51375; PPR; 16.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat.
FT CHAIN 1..659
FT /note="Pentatricopeptide repeat-containing protein
FT At3g48810"
FT /id="PRO_0000356129"
FT REPEAT 75..109
FT /note="PPR 1"
FT REPEAT 110..144
FT /note="PPR 2"
FT REPEAT 145..179
FT /note="PPR 3"
FT REPEAT 180..214
FT /note="PPR 4"
FT REPEAT 215..243
FT /note="PPR 5"
FT REPEAT 245..279
FT /note="PPR 6"
FT REPEAT 280..314
FT /note="PPR 7"
FT REPEAT 315..350
FT /note="PPR 8"
FT REPEAT 351..385
FT /note="PPR 9"
FT REPEAT 386..420
FT /note="PPR 10"
FT REPEAT 421..455
FT /note="PPR 11"
FT REPEAT 456..490
FT /note="PPR 12"
FT REPEAT 492..526
FT /note="PPR 13"
FT REPEAT 527..561
FT /note="PPR 14"
FT REPEAT 562..598
FT /note="PPR 15"
FT REPEAT 599..633
FT /note="PPR 16"
SQ SEQUENCE 659 AA; 74187 MW; 7C1B398F305B2D8E CRC64;
MYLKEGCSLL LKVQKPLIPF VLNTNLNVNH LLTESPNHAE IKELDVVKRL RQESCVPLAL
HFFKSIANSN LFKHTPLTFE VMIRKLAMDG QVDSVQYLLQ QMKLQGFHCS EDLFISVISV
YRQVGLAERA VEMFYRIKEF GCDPSVKIYN HVLDTLLGEN RIQMIYMVYR DMKRDGFEPN
VFTYNVLLKA LCKNNKVDGA KKLLVEMSNK GCCPDAVSYT TVISSMCEVG LVKEGRELAE
RFEPVVSVYN ALINGLCKEH DYKGAFELMR EMVEKGISPN VISYSTLINV LCNSGQIELA
FSFLTQMLKR GCHPNIYTLS SLVKGCFLRG TTFDALDLWN QMIRGFGLQP NVVAYNTLVQ
GFCSHGNIVK AVSVFSHMEE IGCSPNIRTY GSLINGFAKR GSLDGAVYIW NKMLTSGCCP
NVVVYTNMVE ALCRHSKFKE AESLIEIMSK ENCAPSVPTF NAFIKGLCDA GRLDWAEKVF
RQMEQQHRCP PNIVTYNELL DGLAKANRIE EAYGLTREIF MRGVEWSSST YNTLLHGSCN
AGLPGIALQL VGKMMVDGKS PDEITMNMII LAYCKQGKAE RAAQMLDLVS CGRRKWRPDV
ISYTNVIWGL CRSNCREDGV ILLERMISAG IVPSIATWSV LINCFILDDI VRAHDQFTI
