PP275_ARATH
ID PP275_ARATH Reviewed; 638 AA.
AC P0C8A0; Q9M2Y5;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 16-DEC-2008, sequence version 1.
DT 03-AUG-2022, entry version 83.
DE RecName: Full=Pentatricopeptide repeat-containing protein At3g49730;
GN OrderedLocusNames=At3g49730; ORFNames=T16K5.80;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAB66911.1; Type=Erroneous gene model prediction; Note=The predicted gene has been split into 2 genes: At3g49725 and At3g49730.; Evidence={ECO:0000305};
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AL132965; CAB66911.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002686; AEE78583.1; -; Genomic_DNA.
DR PIR; T46039; T46039.
DR RefSeq; NP_001319717.1; NM_001339438.1.
DR AlphaFoldDB; P0C8A0; -.
DR SMR; P0C8A0; -.
DR STRING; 3702.AT3G49730.1; -.
DR iPTMnet; P0C8A0; -.
DR PaxDb; P0C8A0; -.
DR PRIDE; P0C8A0; -.
DR ProteomicsDB; 248958; -.
DR EnsemblPlants; AT3G49730.1; AT3G49730.1; AT3G49730.
DR GeneID; 28719394; -.
DR Gramene; AT3G49730.1; AT3G49730.1; AT3G49730.
DR KEGG; ath:AT3G49730; -.
DR Araport; AT3G49730; -.
DR TAIR; locus:2097395; AT3G49730.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_20_1; -.
DR InParanoid; P0C8A0; -.
DR OMA; DVWSCIV; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; P0C8A0; -.
DR PRO; PR:P0C8A0; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; P0C8A0; baseline and differential.
DR Gene3D; 1.25.40.10; -; 5.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 3.
DR TIGRFAMs; TIGR00756; PPR; 8.
DR PROSITE; PS51375; PPR; 11.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat.
FT CHAIN 1..638
FT /note="Pentatricopeptide repeat-containing protein
FT At3g49730"
FT /id="PRO_0000356134"
FT REPEAT 130..164
FT /note="PPR 1"
FT REPEAT 166..200
FT /note="PPR 2"
FT REPEAT 201..231
FT /note="PPR 3"
FT REPEAT 235..269
FT /note="PPR 4"
FT REPEAT 270..304
FT /note="PPR 5"
FT REPEAT 305..340
FT /note="PPR 6"
FT REPEAT 341..375
FT /note="PPR 7"
FT REPEAT 376..410
FT /note="PPR 8"
FT REPEAT 411..445
FT /note="PPR 9"
FT REPEAT 446..480
FT /note="PPR 10"
FT REPEAT 483..513
FT /note="PPR 11"
FT REPEAT 520..554
FT /note="PPR 12"
FT REGION 604..638
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 638 AA; 73230 MW; A7ED2D175C1738A0 CRC64;
MRRFSTIVDL LISKKPSSQA NSRIDLICKR FHISRVLNND FVESTERKNG VGLVCPEKHE
DEFAGEVEKI YRILRNHHSR VPKLELALNE SGIDLRPGLI IRVLSRCGDA GNLGYRFFLW
ATKQPGYFHS YEVCKSMVMI LSKMRQFGAV WGLIEEMRKT NPELIEPELF VVLMRRFASA
NMVKKAVEVL DEMPKYGLEP DEYVFGCLLD ALCKNGSVKE ASKVFEDMRE KFPPNLRYFT
SLLYGWCREG KLMEAKEVLV QMKEAGLEPD IVVFTNLLSG YAHAGKMADA YDLMNDMRKR
GFEPNVNCYT VLIQALCRTE KRMDEAMRVF VEMERYGCEA DIVTYTALIS GFCKWGMIDK
GYSVLDDMRK KGVMPSQVTY MQIMVAHEKK EQFEECLELI EKMKRRGCHP DLLIYNVVIR
LACKLGEVKE AVRLWNEMEA NGLSPGVDTF VIMINGFTSQ GFLIEACNHF KEMVSRGIFS
APQYGTLKSL LNNLVRDDKL EMAKDVWSCI SNKTSSCELN VSAWTIWIHA LYAKGHVKEA
CSYCLDMMEM DLMPQPNTYA KLMKGLNKLY NRTIAAEITE KVVKMASERE MSFKMYKKKG
EEDLIEKAKP KGNKEGKKKG TDHQRYKGRG ERSRAKAL
