PP277_ARATH
ID PP277_ARATH Reviewed; 794 AA.
AC Q9SCT2;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 105.
DE RecName: Full=Pentatricopeptide repeat-containing protein At3g50420;
GN Name=PCMP-E85; OrderedLocusNames=At3g50420; ORFNames=T20E23_20;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-E subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AL133363; CAB62471.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE78665.1; -; Genomic_DNA.
DR PIR; T46073; T46073.
DR RefSeq; NP_190611.1; NM_114902.1.
DR AlphaFoldDB; Q9SCT2; -.
DR SMR; Q9SCT2; -.
DR STRING; 3702.AT3G50420.1; -.
DR PaxDb; Q9SCT2; -.
DR PRIDE; Q9SCT2; -.
DR EnsemblPlants; AT3G50420.1; AT3G50420.1; AT3G50420.
DR GeneID; 824206; -.
DR Gramene; AT3G50420.1; AT3G50420.1; AT3G50420.
DR KEGG; ath:AT3G50420; -.
DR Araport; AT3G50420; -.
DR TAIR; locus:2098670; AT3G50420.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_15_1_1; -.
DR InParanoid; Q9SCT2; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9SCT2; -.
DR PRO; PR:Q9SCT2; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9SCT2; baseline and differential.
DR Genevisible; Q9SCT2; AT.
DR Gene3D; 1.25.40.10; -; 6.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 8.
DR Pfam; PF13041; PPR_2; 2.
DR SUPFAM; SSF48452; SSF48452; 1.
DR TIGRFAMs; TIGR00756; PPR; 5.
DR PROSITE; PS51375; PPR; 17.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat.
FT CHAIN 1..794
FT /note="Pentatricopeptide repeat-containing protein
FT At3g50420"
FT /id="PRO_0000356136"
FT REPEAT 131..165
FT /note="PPR 1"
FT REPEAT 166..197
FT /note="PPR 2"
FT REPEAT 198..232
FT /note="PPR 3"
FT REPEAT 233..263
FT /note="PPR 4"
FT REPEAT 264..298
FT /note="PPR 5"
FT REPEAT 299..333
FT /note="PPR 6"
FT REPEAT 334..364
FT /note="PPR 7"
FT REPEAT 365..399
FT /note="PPR 8"
FT REPEAT 401..435
FT /note="PPR 9"
FT REPEAT 436..470
FT /note="PPR 10"
FT REPEAT 471..501
FT /note="PPR 11"
FT REPEAT 502..536
FT /note="PPR 12"
FT REPEAT 537..567
FT /note="PPR 13"
FT REPEAT 568..602
FT /note="PPR 14"
FT REPEAT 603..637
FT /note="PPR 15"
FT REPEAT 638..672
FT /note="PPR 16"
FT REGION 674..749
FT /note="Type E motif"
FT REGION 751..782
FT /note="Type E(+) motif"
SQ SEQUENCE 794 AA; 88517 MW; 62D4976F16943EFE CRC64;
MTRGSMKRSV LFVETDAAAE YPYANNNLIS MYVRCSSLEQ ARKVFDKMPQ RNIVTLFGLS
AVFEYVSMGS SLHSQIIKLG SFQMIFFMPL NEIASSVVEL TRKCVSITVL KRARQIHALV
LTAGAGAATE SPYANNNLIS MYVRCGSLEQ ARKVFDKMPH RNVVSYNALY SAYSRNPDFA
SYAFPLTTHM AFEYVKPNSS TFTSLVQVCA VLEDVLMGSS LNSQIIKLGY SDNVVVQTSV
LGMYSSCGDL ESARRIFDCV NNRDAVAWNT MIVGSLKNDK IEDGLMFFRN MLMSGVDPTQ
FTYSIVLNGC SKLGSYSLGK LIHARIIVSD SLADLPLDNA LLDMYCSCGD MREAFYVFGR
IHNPNLVSWN SIISGCSENG FGEQAMLMYR RLLRMSTPRP DEYTFSAAIS ATAEPERFVH
GKLLHGQVTK LGYERSVFVG TTLLSMYFKN REAESAQKVF DVMKERDVVL WTEMIVGHSR
LGNSELAVQF FIEMYREKNR SDGFSLSSVI GACSDMAMLR QGEVFHCLAI RTGFDCVMSV
CGALVDMYGK NGKYETAETI FSLASNPDLK CWNSMLGAYS QHGMVEKALS FFEQILENGF
MPDAVTYLSL LAACSHRGST LQGKFLWNQM KEQGIKAGFK HYSCMVNLVS KAGLVDEALE
LIEQSPPGNN QAELWRTLLS ACVNTRNLQI GLYAAEQILK LDPEDTATHI LLSNLYAVNG
RWEDVAEMRR KIRGLASSKD PGLSWIEVNN NNTQVFSSGD QSNPEVVSQA QDELNRLKRN
MLCKSSFNKL VCSN
