PP286_ARATH
ID PP286_ARATH Reviewed; 741 AA.
AC Q0WN01; Q9M2F7;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 16-DEC-2008, sequence version 2.
DT 03-AUG-2022, entry version 90.
DE RecName: Full=Pentatricopeptide repeat-containing protein At3g58590;
GN OrderedLocusNames=At3g58590; ORFNames=F14P22.180;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAB68197.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AL137082; CAB68197.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002686; AEE79802.1; -; Genomic_DNA.
DR EMBL; AK229655; BAF01499.1; -; mRNA.
DR PIR; T45679; T45679.
DR RefSeq; NP_191418.2; NM_115721.3.
DR AlphaFoldDB; Q0WN01; -.
DR SMR; Q0WN01; -.
DR PaxDb; Q0WN01; -.
DR PRIDE; Q0WN01; -.
DR EnsemblPlants; AT3G58590.1; AT3G58590.1; AT3G58590.
DR GeneID; 825028; -.
DR Gramene; AT3G58590.1; AT3G58590.1; AT3G58590.
DR KEGG; ath:AT3G58590; -.
DR Araport; AT3G58590; -.
DR TAIR; locus:2076456; AT3G58590.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_15_6_1; -.
DR InParanoid; Q0WN01; -.
DR OMA; IAMDSFS; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q0WN01; -.
DR PRO; PR:Q0WN01; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q0WN01; baseline and differential.
DR Genevisible; Q0WN01; AT.
DR Gene3D; 1.25.40.10; -; 6.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 7.
DR Pfam; PF13041; PPR_2; 4.
DR TIGRFAMs; TIGR00756; PPR; 6.
DR PROSITE; PS51375; PPR; 15.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat.
FT CHAIN 1..741
FT /note="Pentatricopeptide repeat-containing protein
FT At3g58590"
FT /id="PRO_0000356145"
FT REPEAT 48..78
FT /note="PPR 1"
FT REPEAT 79..113
FT /note="PPR 2"
FT REPEAT 114..146
FT /note="PPR 3"
FT REPEAT 148..178
FT /note="PPR 4"
FT REPEAT 179..213
FT /note="PPR 5"
FT REPEAT 214..248
FT /note="PPR 6"
FT REPEAT 249..279
FT /note="PPR 7"
FT REPEAT 280..314
FT /note="PPR 8"
FT REPEAT 315..349
FT /note="PPR 9"
FT REPEAT 350..380
FT /note="PPR 10"
FT REPEAT 381..414
FT /note="PPR 11"
FT REPEAT 415..445
FT /note="PPR 12"
FT REPEAT 446..481
FT /note="PPR 13"
FT REPEAT 483..508
FT /note="PPR 14"
FT REPEAT 509..543
FT /note="PPR 15"
FT REPEAT 544..578
FT /note="PPR 16"
FT REPEAT 580..610
FT /note="PPR 17"
FT REPEAT 611..645
FT /note="PPR 18"
FT REPEAT 646..680
FT /note="PPR 19"
FT REPEAT 681..715
FT /note="PPR 20"
FT CONFLICT 681
FT /note="E -> G (in Ref. 3; BAF01499)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 741 AA; 82690 MW; 0EBF9C25AC41B586 CRC64;
MSLSCGDLAN HNDRVVSLLN VCRKAPSFAR TKALHALSIT LCSVLLQPVY VCNNIISLYE
KLGEVSLAGK VFDQMPERNK VSFNTIIKGY SKYGDVDKAW GVFSEMRYFG YLPNQSTVSG
LLSCASLDVR AGTQLHGLSL KYGLFMADAF VGTCLLCLYG RLDLLEMAEQ VFEDMPFKSL
ETWNHMMSLL GHRGFLKECM FFFRELVRMG ASLTESSFLG VLKGVSCVKD LDISKQLHCS
ATKKGLDCEI SVVNSLISAY GKCGNTHMAE RMFQDAGSWD IVSWNAIICA TAKSENPLKA
LKLFVSMPEH GFSPNQGTYV SVLGVSSLVQ LLSCGRQIHG MLIKNGCETG IVLGNALIDF
YAKCGNLEDS RLCFDYIRDK NIVCWNALLS GYANKDGPIC LSLFLQMLQM GFRPTEYTFS
TALKSCCVTE LQQLHSVIVR MGYEDNDYVL SSLMRSYAKN QLMNDALLLL DWASGPTSVV
PLNIVAGIYS RRGQYHESVK LISTLEQPDT VSWNIAIAAC SRSDYHEEVI ELFKHMLQSN
IRPDKYTFVS ILSLCSKLCD LTLGSSIHGL ITKTDFSCAD TFVCNVLIDM YGKCGSIRSV
MKVFEETREK NLITWTALIS CLGIHGYGQE ALEKFKETLS LGFKPDRVSF ISILTACRHG
GMVKEGMGLF QKMKDYGVEP EMDHYRCAVD LLARNGYLKE AEHLIREMPF PADAPVWRTF
LDGCNRFAEE QRNTLNVVSF Q
