PP291_ARATH
ID PP291_ARATH Reviewed; 498 AA.
AC Q9M2C8;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 109.
DE RecName: Full=Pentatricopeptide repeat-containing protein At3g61360;
GN OrderedLocusNames=At3g61360; ORFNames=T20K12.260;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AL137898; CAB71066.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE80190.1; -; Genomic_DNA.
DR EMBL; BT001924; AAN71923.1; -; mRNA.
DR PIR; T47928; T47928.
DR RefSeq; NP_191695.1; NM_116000.1.
DR AlphaFoldDB; Q9M2C8; -.
DR SMR; Q9M2C8; -.
DR STRING; 3702.AT3G61360.1; -.
DR PaxDb; Q9M2C8; -.
DR PRIDE; Q9M2C8; -.
DR ProteomicsDB; 249198; -.
DR EnsemblPlants; AT3G61360.1; AT3G61360.1; AT3G61360.
DR GeneID; 825308; -.
DR Gramene; AT3G61360.1; AT3G61360.1; AT3G61360.
DR KEGG; ath:AT3G61360; -.
DR Araport; AT3G61360; -.
DR TAIR; locus:2098941; AT3G61360.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_20_1; -.
DR InParanoid; Q9M2C8; -.
DR OMA; NDHPFPD; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9M2C8; -.
DR PRO; PR:Q9M2C8; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9M2C8; baseline and differential.
DR Genevisible; Q9M2C8; AT.
DR GO; GO:0005739; C:mitochondrion; IDA:TAIR.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IMP:TAIR.
DR Gene3D; 1.25.40.10; -; 3.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 3.
DR Pfam; PF13041; PPR_2; 2.
DR TIGRFAMs; TIGR00756; PPR; 5.
DR PROSITE; PS51375; PPR; 9.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat.
FT CHAIN 1..498
FT /note="Pentatricopeptide repeat-containing protein
FT At3g61360"
FT /id="PRO_0000356150"
FT REPEAT 102..132
FT /note="PPR 1"
FT REPEAT 138..172
FT /note="PPR 2"
FT REPEAT 175..205
FT /note="PPR 3"
FT REPEAT 209..243
FT /note="PPR 4"
FT REPEAT 244..278
FT /note="PPR 5"
FT REPEAT 279..313
FT /note="PPR 6"
FT REPEAT 314..348
FT /note="PPR 7"
FT REPEAT 349..385
FT /note="PPR 8"
FT REPEAT 386..420
FT /note="PPR 9"
SQ SEQUENCE 498 AA; 56980 MW; FA8DDD82A003B7A9 CRC64;
MLQKISSDSY RRLLAPVLSS SSSLSSTSIN RTEIERITII INGHPFPNHP IQPILAKHIP
LSSLSPEFVS EVLGRLFAAH SNGLKALEFF KYSLKSSKSS PTSDSFEKTL HILARMRYFD
QAWALMAEVR KDYPNLLSFK SMSILLCKIA KFGSYEETLE AFVKMEKEIF RKKFGVDEFN
ILLRAFCTER EMKEARSIFE KLHSRFNPDV KTMNILLLGF KEAGDVTATE LFYHEMVKRG
FKPNSVTYGI RIDGFCKKRN FGEALRLFED MDRLDFDITV QILTTLIHGS GVARNKIKAR
QLFDEISKRG LTPDCGAYNA LMSSLMKCGD VSGAIKVMKE MEEKGIEPDS VTFHSMFIGM
MKSKEFGFNG VCEYYQKMKE RSLVPKTPTI VMLMKLFCHN GEVNLGLDLW KYMLEKGYCP
HGHALELLTT ALCARRRAND AFECSWQTVE RGRCVSEPVY RMLETSLSSN NELKKLEELK
EEIQKLHSFL PPPEIQLM
