PP292_ARATH
ID PP292_ARATH Reviewed; 766 AA.
AC Q9M316;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 108.
DE RecName: Full=Pentatricopeptide repeat-containing protein At3g61520, mitochondrial;
DE Flags: Precursor;
GN OrderedLocusNames=At3g61520; ORFNames=F2A19.120;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AL132962; CAB71082.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE80217.1; -; Genomic_DNA.
DR PIR; T47944; T47944.
DR RefSeq; NP_191711.1; NM_116017.3.
DR AlphaFoldDB; Q9M316; -.
DR SMR; Q9M316; -.
DR PaxDb; Q9M316; -.
DR PRIDE; Q9M316; -.
DR ProteomicsDB; 249199; -.
DR EnsemblPlants; AT3G61520.1; AT3G61520.1; AT3G61520.
DR GeneID; 825325; -.
DR Gramene; AT3G61520.1; AT3G61520.1; AT3G61520.
DR KEGG; ath:AT3G61520; -.
DR Araport; AT3G61520; -.
DR TAIR; locus:2082832; AT3G61520.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_10_1; -.
DR InParanoid; Q9M316; -.
DR OMA; IHAYCLN; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9M316; -.
DR PRO; PR:Q9M316; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9M316; baseline and differential.
DR Genevisible; Q9M316; AT.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR Gene3D; 1.25.40.10; -; 6.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 4.
DR TIGRFAMs; TIGR00756; PPR; 11.
DR PROSITE; PS51375; PPR; 16.
PE 2: Evidence at transcript level;
KW Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT TRANSIT 1..30
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 31..766
FT /note="Pentatricopeptide repeat-containing protein
FT At3g61520, mitochondrial"
FT /id="PRO_0000356151"
FT REPEAT 151..181
FT /note="PPR 1"
FT REPEAT 184..218
FT /note="PPR 2"
FT REPEAT 221..257
FT /note="PPR 3"
FT REPEAT 258..292
FT /note="PPR 4"
FT REPEAT 293..327
FT /note="PPR 5"
FT REPEAT 328..358
FT /note="PPR 6"
FT REPEAT 369..404
FT /note="PPR 7"
FT REPEAT 405..439
FT /note="PPR 8"
FT REPEAT 440..474
FT /note="PPR 9"
FT REPEAT 475..509
FT /note="PPR 10"
FT REPEAT 510..544
FT /note="PPR 11"
FT REPEAT 545..579
FT /note="PPR 12"
FT REPEAT 580..614
FT /note="PPR 13"
FT REPEAT 615..650
FT /note="PPR 14"
FT REPEAT 651..685
FT /note="PPR 15"
FT REPEAT 686..720
FT /note="PPR 16"
SQ SEQUENCE 766 AA; 86906 MW; 8F2A64BFAD5F6F0E CRC64;
MSIMLSISRR RNSYILLNHS RFLRRFSYDV DPRPEIKLES QEFVVVKFVK TLQKTPQHDW
ASSESLSALV VSSSSASPLV FSQITRRLGS YSLAISFFEY LDAKSQSLKR REESLSLALQ
SVIEFAGSEP DPRDKLLRLY EIAKEKNIPL TVVATNLLIR WFGRMGMVNQ SVLVYERLDS
NMKNSQVRNV VVDVLLRNGL VDDAFKVLDE MLQKESVFPP NRITADIVLH EVWKGRLLTE
EKIIALISRF SSHGVSPNSV WLTRFISSLC KNARANAAWD ILSDLMKNKT PLEAPPFNAL
LSCLGRNMDI SRMNDLVLKM DEVKIRPDVV TLGILINTLC KSRRVDEALE VFEKMRGKRT
DDGNVIKADS IHFNTLIDGL CKVGRLKEAE ELLVRMKLEE RCAPNAVTYN CLIDGYCRAG
KLETAKEVVS RMKEDEIKPN VVTVNTIVGG MCRHHGLNMA VVFFMDMEKE GVKGNVVTYM
TLIHACCSVS NVEKAMYWYE KMLEAGCSPD AKIYYALISG LCQVRRDHDA IRVVEKLKEG
GFSLDLLAYN MLIGLFCDKN NTEKVYEMLT DMEKEGKKPD SITYNTLISF FGKHKDFESV
ERMMEQMRED GLDPTVTTYG AVIDAYCSVG ELDEALKLFK DMGLHSKVNP NTVIYNILIN
AFSKLGNFGQ ALSLKEEMKM KMVRPNVETY NALFKCLNEK TQGETLLKLM DEMVEQSCEP
NQITMEILME RLSGSDELVK LRKFMQGYSV ASPTEKASPF DVFSLG
