ATB17_ARATH
ID ATB17_ARATH Reviewed; 275 AA.
AC Q8S9N6; Q9ZVG1;
DT 31-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2002, sequence version 1.
DT 03-AUG-2022, entry version 126.
DE RecName: Full=Homeobox-leucine zipper protein ATHB-17;
DE AltName: Full=HD-ZIP protein ATHB-17;
DE AltName: Full=Homeodomain transcription factor ATHB-17;
GN Name=ATHB-17; OrderedLocusNames=At2g01430; ORFNames=F2I9.5;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Columbia;
RA Ruzza V., Carabelli M., Ciarbelli A.R., Sessa G., Steindler C., Ruberti I.;
RT "Nucleotide sequence of the Arabidopsis ATHB-17 mRNA, encoding an HD-Zip II
RT protein related to ATHB-2.";
RL Submitted (FEB-2002) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP GENE FAMILY.
RX PubMed=16055682; DOI=10.1104/pp.105.063461;
RA Henriksson E., Olsson A.S.B., Johannesson H., Johansson H., Hanson J.,
RA Engstroem P., Soederman E.;
RT "Homeodomain leucine zipper class I genes in Arabidopsis. Expression
RT patterns and phylogenetic relationships.";
RL Plant Physiol. 139:509-518(2005).
CC -!- FUNCTION: Probable transcription factor. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the HD-ZIP homeobox family. Class II subfamily.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAC67320.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AJ431181; CAD24011.1; -; mRNA.
DR EMBL; AC005560; AAC67320.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002685; AEC05450.1; -; Genomic_DNA.
DR PIR; F84424; F84424.
DR RefSeq; NP_178252.2; NM_126204.3.
DR AlphaFoldDB; Q8S9N6; -.
DR SMR; Q8S9N6; -.
DR BioGRID; 74; 4.
DR STRING; 3702.AT2G01430.1; -.
DR PaxDb; Q8S9N6; -.
DR PRIDE; Q8S9N6; -.
DR ProteomicsDB; 246531; -.
DR EnsemblPlants; AT2G01430.1; AT2G01430.1; AT2G01430.
DR GeneID; 814671; -.
DR Gramene; AT2G01430.1; AT2G01430.1; AT2G01430.
DR KEGG; ath:AT2G01430; -.
DR Araport; AT2G01430; -.
DR TAIR; locus:2049614; AT2G01430.
DR eggNOG; KOG0483; Eukaryota.
DR HOGENOM; CLU_049516_6_0_1; -.
DR InParanoid; Q8S9N6; -.
DR OMA; WITAGME; -.
DR OrthoDB; 1227444at2759; -.
DR PhylomeDB; Q8S9N6; -.
DR PRO; PR:Q8S9N6; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q8S9N6; baseline and differential.
DR Genevisible; Q8S9N6; AT.
DR GO; GO:0005634; C:nucleus; IDA:TAIR.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IPI:TAIR.
DR GO; GO:0009651; P:response to salt stress; IMP:TAIR.
DR CDD; cd00086; homeodomain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017970; Homeobox_CS.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR003106; Leu_zip_homeo.
DR Pfam; PF02183; HALZ; 1.
DR Pfam; PF00046; Homeodomain; 1.
DR SMART; SM00340; HALZ; 1.
DR SMART; SM00389; HOX; 1.
DR SUPFAM; SSF46689; SSF46689; 1.
DR PROSITE; PS00027; HOMEOBOX_1; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Homeobox; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..275
FT /note="Homeobox-leucine zipper protein ATHB-17"
FT /id="PRO_0000257796"
FT DNA_BIND 136..195
FT /note="Homeobox"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00108"
FT REGION 95..143
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 203..224
FT /note="Leucine-zipper"
FT REGION 252..275
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 275 AA; 31690 MW; 25CD35EE398CE249 CRC64;
MIKLLFTYIC TYTYKLYALY HMDYACVCMY KYKGIVTLQV CLFYIKLRVF LSNFTFSSSI
LALKNPNNSL IKIMAILPEN SSNLDLTISV PGFSSSPLSD EGSGGGRDQL RLDMNRLPSS
EDGDDEEFSH DDGSAPPRKK LRLTREQSRL LEDSFRQNHT LNPKQKEVLA KHLMLRPRQI
EVWFQNRRAR SKLKQTEMEC EYLKRWFGSL TEENHRLHRE VEELRAMKVG PTTVNSASSL
TMCPRCERVT PAASPSRAVV PVPAKKTFPP QERDR
