PP326_ARATH
ID PP326_ARATH Reviewed; 701 AA.
AC P0C8Q3; Q9SNA8;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 10-FEB-2009, sequence version 1.
DT 25-MAY-2022, entry version 73.
DE RecName: Full=Pentatricopeptide repeat-containing protein At4g19890;
GN OrderedLocusNames=At4g19890; ORFNames=F18F4.6;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617198; DOI=10.1038/47134;
RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAB52870.1; Type=Erroneous gene model prediction; Note=The predicted gene has been split into 2 genes: At4g19890 and At4g19900.; Evidence={ECO:0000305};
CC Sequence=CAB78991.1; Type=Erroneous gene model prediction; Note=The predicted gene has been split into 2 genes: At4g19890 and At4g19900.; Evidence={ECO:0000305};
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AL021637; CAB52870.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AL161551; CAB78991.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002687; AEE84242.1; -; Genomic_DNA.
DR PIR; F85225; F85225.
DR RefSeq; NP_001190774.1; NM_001203845.2.
DR AlphaFoldDB; P0C8Q3; -.
DR SMR; P0C8Q3; -.
DR CAZy; GT32; Glycosyltransferase Family 32.
DR PaxDb; P0C8Q3; -.
DR PRIDE; P0C8Q3; -.
DR ProteomicsDB; 248989; -.
DR EnsemblPlants; AT4G19890.1; AT4G19890.1; AT4G19890.
DR GeneID; 10723133; -.
DR Gramene; AT4G19890.1; AT4G19890.1; AT4G19890.
DR KEGG; ath:AT4G19890; -.
DR Araport; AT4G19890; -.
DR TAIR; locus:6530298213; AT4G19890.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_24_1; -.
DR InParanoid; P0C8Q3; -.
DR OMA; KRLVPCE; -.
DR OrthoDB; 1344243at2759; -.
DR PRO; PR:P0C8Q3; -.
DR Proteomes; UP000006548; Chromosome 4.
DR ExpressionAtlas; P0C8Q3; baseline and differential.
DR Genevisible; P0C8Q3; AT.
DR Gene3D; 1.25.40.10; -; 4.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 5.
DR TIGRFAMs; TIGR00756; PPR; 12.
DR PROSITE; PS51375; PPR; 14.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat.
FT CHAIN 1..701
FT /note="Pentatricopeptide repeat-containing protein
FT At4g19890"
FT /id="PRO_0000363443"
FT REPEAT 146..180
FT /note="PPR 1"
FT REPEAT 181..215
FT /note="PPR 2"
FT REPEAT 216..250
FT /note="PPR 3"
FT REPEAT 251..285
FT /note="PPR 4"
FT REPEAT 286..320
FT /note="PPR 5"
FT REPEAT 321..356
FT /note="PPR 6"
FT REPEAT 357..391
FT /note="PPR 7"
FT REPEAT 392..426
FT /note="PPR 8"
FT REPEAT 427..461
FT /note="PPR 9"
FT REPEAT 462..496
FT /note="PPR 10"
FT REPEAT 497..531
FT /note="PPR 11"
FT REPEAT 532..566
FT /note="PPR 12"
FT REPEAT 567..601
FT /note="PPR 13"
FT REPEAT 602..632
FT /note="PPR 14"
FT REPEAT 634..668
FT /note="PPR 15"
SQ SEQUENCE 701 AA; 78984 MW; C0C73C7C76D9B555 CRC64;
MLSLLLPKSN RFLLRTFEIP NSLCSLFFFR LISSDHESSD LSLPSSPSSS PSQCLVKSVC
SLVCTSYLRQ NHVVSSPHRV NLDFDANSLT HEQAITVVAS LASESGSMVA LCFFYWAVGF
EKFRHFMRLY LVTADSLLAN GNLQKAHEVM RCMLRNFSEI GRLNEAVGMV MDMQNQGLTP
SSITMNCVLE IAVELGLIEY AENVFDEMSV RGVVPDSSSY KLMVIGCFRD GKIQEADRWL
TGMIQRGFIP DNATCTLILT ALCENGLVNR AIWYFRKMID LGFKPNLINF TSLIDGLCKK
GSIKQAFEML EEMVRNGWKP NVYTHTALID GLCKRGWTEK AFRLFLKLVR SDTYKPNVHT
YTSMIGGYCK EDKLNRAEML FSRMKEQGLF PNVNTYTTLI NGHCKAGSFG RAYELMNLMG
DEGFMPNIYT YNAAIDSLCK KSRAPEAYEL LNKAFSCGLE ADGVTYTILI QEQCKQNDIN
QALAFFCRMN KTGFEADMRL NNILIAAFCR QKKMKESERL FQLVVSLGLI PTKETYTSMI
SCYCKEGDID LALKYFHNMK RHGCVPDSFT YGSLISGLCK KSMVDEACKL YEAMIDRGLS
PPEVTRVTLA YEYCKRNDSA NAMILLEPLD KKLWIRTVRT LVRKLCSEKK VGVAALFFQK
LLEKDSSADR VTLAAFTTAC SESGKNNLVT DLTERISRGV G
