PP331_ARATH
ID PP331_ARATH Reviewed; 585 AA.
AC O49558; F4JIN2;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 10-FEB-2009, sequence version 2.
DT 25-MAY-2022, entry version 114.
DE RecName: Full=Pentatricopeptide repeat-containing protein At4g21170;
GN OrderedLocusNames=At4g21170; ORFNames=F7J7.110;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617198; DOI=10.1038/47134;
RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAA17536.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=CAB79117.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AL021960; CAA17536.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AL161554; CAB79117.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002687; AEE84415.2; -; Genomic_DNA.
DR PIR; T04948; T04948.
DR RefSeq; NP_001320017.1; NM_001341474.1.
DR AlphaFoldDB; O49558; -.
DR SMR; O49558; -.
DR STRING; 3702.AT4G21170.1; -.
DR PRIDE; O49558; -.
DR EnsemblPlants; AT4G21170.1; AT4G21170.1; AT4G21170.
DR GeneID; 827865; -.
DR Gramene; AT4G21170.1; AT4G21170.1; AT4G21170.
DR KEGG; ath:AT4G21170; -.
DR Araport; AT4G21170; -.
DR TAIR; locus:2127363; AT4G21170.
DR eggNOG; KOG4197; Eukaryota.
DR InParanoid; O49558; -.
DR OMA; PDLKSQC; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; O49558; -.
DR PRO; PR:O49558; -.
DR Proteomes; UP000006548; Chromosome 4.
DR ExpressionAtlas; O49558; baseline and differential.
DR GO; GO:0005739; C:mitochondrion; HDA:TAIR.
DR GO; GO:0009536; C:plastid; HDA:TAIR.
DR Gene3D; 1.25.40.10; -; 4.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF13041; PPR_2; 1.
DR TIGRFAMs; TIGR00756; PPR; 4.
DR PROSITE; PS51375; PPR; 11.
PE 3: Inferred from homology;
KW Reference proteome; Repeat.
FT CHAIN 1..585
FT /note="Pentatricopeptide repeat-containing protein
FT At4g21170"
FT /id="PRO_0000363448"
FT REPEAT 152..186
FT /note="PPR 1"
FT REPEAT 187..221
FT /note="PPR 2"
FT REPEAT 222..247
FT /note="PPR 3"
FT REPEAT 252..286
FT /note="PPR 4"
FT REPEAT 287..321
FT /note="PPR 5"
FT REPEAT 324..358
FT /note="PPR 6"
FT REPEAT 360..394
FT /note="PPR 7"
FT REPEAT 396..431
FT /note="PPR 8"
FT REPEAT 432..466
FT /note="PPR 9"
FT REPEAT 467..501
FT /note="PPR 10"
FT REPEAT 502..534
FT /note="PPR 11"
FT REPEAT 538..572
FT /note="PPR 12"
SQ SEQUENCE 585 AA; 67092 MW; 8ACA436726EF7228 CRC64;
MVLIHTSVGF FKRFSTSATP STSSASDWKT QQTLFRVATE ISSILLQRRN WITHLQYVKS
KLPRSTLTSP VFLQILRETR KCPKTTLDFF DFAKTHLRFE PDLKSHCRVI EVAAESGLLE
RAEMLLRPLV ETNSVSLVVG EMHRWFEGEV SLSVSLSLVL EYYALKGSHH NGLEVFGFMR
RLRLSPSQSA YNSLLGSLVK ENQFRVALCL YSAMVRNGIV SDELTWDLIA QILCEQGRSK
SVFKLMETGV ESCKIYTNLV ECYSRNGEFD AVFSLIHEMD DKKLELSFCS YGCVLDDACR
LGDAEFIDKV LCLMVEKKFV TLGDSAVNDK IIERLCDMGK TFASEMLFRK ACNGETVRLW
DSTYGCMLKA LSRKKRTKEA VDVYRMICRK GITVLDESCY IEFANALCRD DNSSEEEEEL
LVDVIKRGFV PCTHKLSEVL ASMCRKRRWK SAEKLLDSVM EMEVYFDSFA CGLLMERYCR
SGKLEKALVL HEKIKKMKGS LDVNAYNAVL DRLMMRQKEM VEEAVVVFEY MKEINSVNSK
SFTIMIQGLC RVKEMKKAMR SHDEMLRLGL KPDLVTYKRL ILGFK
