PP368_ARATH
ID PP368_ARATH Reviewed; 832 AA.
AC P0C8Q6; Q9FTA4;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 10-FEB-2009, sequence version 1.
DT 03-AUG-2022, entry version 76.
DE RecName: Full=Putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial;
DE Flags: Precursor;
GN OrderedLocusNames=At5g08310; ORFNames=F8L15_40;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130714; DOI=10.1038/35048507;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA Bevan M., Fransz P.F.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAC08331.1; Type=Erroneous gene model prediction; Note=The predicted gene has been split into 2 genes: At5g08305 and At5g08310.; Evidence={ECO:0000305};
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AL392174; CAC08331.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED91281.1; -; Genomic_DNA.
DR EMBL; CP002688; ANM68528.1; -; Genomic_DNA.
DR RefSeq; NP_001318509.1; NM_001342994.1.
DR RefSeq; NP_196448.2; NM_120914.2.
DR AlphaFoldDB; P0C8Q6; -.
DR SMR; P0C8Q6; -.
DR PaxDb; P0C8Q6; -.
DR PRIDE; P0C8Q6; -.
DR ProteomicsDB; 249258; -.
DR EnsemblPlants; AT5G08310.1; AT5G08310.1; AT5G08310.
DR EnsemblPlants; AT5G08310.2; AT5G08310.2; AT5G08310.
DR GeneID; 830727; -.
DR Gramene; AT5G08310.1; AT5G08310.1; AT5G08310.
DR Gramene; AT5G08310.2; AT5G08310.2; AT5G08310.
DR KEGG; ath:AT5G08310; -.
DR Araport; AT5G08310; -.
DR TAIR; locus:2150783; AT5G08310.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_1_1; -.
DR InParanoid; P0C8Q6; -.
DR OMA; SKWGEVD; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; P0C8Q6; -.
DR PRO; PR:P0C8Q6; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; P0C8Q6; baseline and differential.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR Gene3D; 1.25.40.10; -; 6.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 6.
DR Pfam; PF13041; PPR_2; 3.
DR Pfam; PF13812; PPR_3; 1.
DR TIGRFAMs; TIGR00756; PPR; 12.
DR PROSITE; PS51375; PPR; 16.
PE 3: Inferred from homology;
KW Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT TRANSIT 1..27
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 28..832
FT /note="Putative pentatricopeptide repeat-containing protein
FT At5g08310, mitochondrial"
FT /id="PRO_0000363505"
FT REPEAT 105..139
FT /note="PPR 1"
FT REPEAT 140..174
FT /note="PPR 2"
FT REPEAT 176..212
FT /note="PPR 3"
FT REPEAT 213..247
FT /note="PPR 4"
FT REPEAT 252..281
FT /note="PPR 5"
FT REPEAT 282..316
FT /note="PPR 6"
FT REPEAT 317..351
FT /note="PPR 7"
FT REPEAT 352..383
FT /note="PPR 8"
FT REPEAT 385..415
FT /note="PPR 9"
FT REPEAT 438..472
FT /note="PPR 10"
FT REPEAT 473..507
FT /note="PPR 11"
FT REPEAT 508..542
FT /note="PPR 12"
FT REPEAT 543..577
FT /note="PPR 13"
FT REPEAT 578..612
FT /note="PPR 14"
FT REPEAT 613..647
FT /note="PPR 15"
FT REPEAT 648..682
FT /note="PPR 16"
FT REPEAT 683..717
FT /note="PPR 17"
FT REPEAT 718..752
FT /note="PPR 18"
FT REPEAT 753..787
FT /note="PPR 19"
SQ SEQUENCE 832 AA; 94071 MW; 274BF2D56F440F39 CRC64;
MAFSRIALLC QRFSRQQQQR QLLHRPLTTK LDNTRFLHPN QSKLAQNLIV IFTRQPFSPD
DPELLILSPE LNTKVVETVL NGFKRWGLAY LFFNWASKQE GYRNDMYAYN AMASILSRAR
QNASLKALVV DVLNSRCFMS PGAFGFFIRC LGNAGLVDEA SSVFDRVREM GLCVPNAYTY
NCLLEAISKS NSSSVELVEA RLKEMRDCGF HFDKFTLTPV LQVYCNTGKS ERALSVFNEI
LSRGWLDEHI STILVVSFCK WGQVDKAFEL IEMLEERDIR LNYKTYCVLI HGFVKESRID
KAFQLFEKMR RMGMNADIAL YDVLIGGLCK HKDLEMALSL YLEIKRSGIP PDRGILGKLL
CSFSEESELS RITEVIIGDI DKKSVMLLYK SLFEGFIRND LVHEAYSFIQ NLMGNYESDG
VSEIVKLLKD HNKAILPDSD SLSIVINCLV KANKVDMAVT LLHDIVQNGL IPGPMMYNNI
IEGMCKEGRS EESLKLLGEM KDAGVEPSQF TLNCIYGCLA ERCDFVGALD LLKKMRFYGF
EPWIKHTTFL VKKLCENGRA VDACKYLDDV AGEGFLGHMV ASTAAIDGLI KNEGVDRGLE
LFRDICANGH CPDVIAYHVL IKALCKACRT MEADILFNEM VSKGLKPTVA TYNSMIDGWC
KEGEIDRGLS CIVRMYEDEK NPDVITYTSL IHGLCASGRP SEAIFRWNEM KGKDCYPNRI
TFMALIQGLC KCGWSGEALV YFREMEEKEM EPDSAVYLSL VSSFLSSENI NAGFGIFREM
VHKGRFPVSV DRNYMLAVNV TSKFVEDLRT SCYLTCLIKD GRIPILAVVS RI
