PP381_ARATH
ID PP381_ARATH Reviewed; 940 AA.
AC Q9LER0; F4K880;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 10-FEB-2009, sequence version 2.
DT 25-MAY-2022, entry version 111.
DE RecName: Full=Pentatricopeptide repeat-containing protein At5g14770, mitochondrial;
DE Flags: Precursor;
GN OrderedLocusNames=At5g14770; ORFNames=T9L3_70;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130714; DOI=10.1038/35048507;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA Bevan M., Fransz P.F.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAC01876.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AL391149; CAC01876.1; ALT_INIT; Genomic_DNA.
DR EMBL; CP002688; AED92075.2; -; Genomic_DNA.
DR EMBL; CP002688; ANM70048.1; -; Genomic_DNA.
DR EMBL; CP002688; ANM70049.1; -; Genomic_DNA.
DR EMBL; CP002688; ANM70050.1; -; Genomic_DNA.
DR EMBL; CP002688; ANM70051.1; -; Genomic_DNA.
DR PIR; T51422; T51422.
DR RefSeq; NP_001318562.1; NM_001343366.1.
DR RefSeq; NP_001331686.1; NM_001343370.1.
DR RefSeq; NP_001331687.1; NM_001343369.1.
DR RefSeq; NP_001331688.1; NM_001343368.1.
DR RefSeq; NP_001331689.1; NM_001343367.1.
DR AlphaFoldDB; Q9LER0; -.
DR SMR; Q9LER0; -.
DR iPTMnet; Q9LER0; -.
DR PaxDb; Q9LER0; -.
DR PRIDE; Q9LER0; -.
DR EnsemblPlants; AT5G14770.1; AT5G14770.1; AT5G14770.
DR EnsemblPlants; AT5G14770.2; AT5G14770.2; AT5G14770.
DR EnsemblPlants; AT5G14770.3; AT5G14770.3; AT5G14770.
DR EnsemblPlants; AT5G14770.4; AT5G14770.4; AT5G14770.
DR EnsemblPlants; AT5G14770.5; AT5G14770.5; AT5G14770.
DR GeneID; 831329; -.
DR Gramene; AT5G14770.1; AT5G14770.1; AT5G14770.
DR Gramene; AT5G14770.2; AT5G14770.2; AT5G14770.
DR Gramene; AT5G14770.3; AT5G14770.3; AT5G14770.
DR Gramene; AT5G14770.4; AT5G14770.4; AT5G14770.
DR Gramene; AT5G14770.5; AT5G14770.5; AT5G14770.
DR KEGG; ath:AT5G14770; -.
DR Araport; AT5G14770; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_19_1; -.
DR InParanoid; Q9LER0; -.
DR OMA; SYNTVIW; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9LER0; -.
DR PRO; PR:Q9LER0; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9LER0; baseline and differential.
DR Genevisible; Q9LER0; AT.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR Gene3D; 1.25.40.10; -; 8.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 8.
DR Pfam; PF13812; PPR_3; 1.
DR TIGRFAMs; TIGR00756; PPR; 16.
DR PROSITE; PS51375; PPR; 23.
PE 3: Inferred from homology;
KW Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT TRANSIT 1..24
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 25..940
FT /note="Pentatricopeptide repeat-containing protein
FT At5g14770, mitochondrial"
FT /id="PRO_0000363518"
FT REPEAT 59..93
FT /note="PPR 1"
FT REPEAT 94..129
FT /note="PPR 2"
FT REPEAT 130..161
FT /note="PPR 3"
FT REPEAT 162..196
FT /note="PPR 4"
FT REPEAT 197..231
FT /note="PPR 5"
FT REPEAT 241..259
FT /note="PPR 6"
FT REPEAT 260..294
FT /note="PPR 7"
FT REPEAT 295..329
FT /note="PPR 8"
FT REPEAT 330..364
FT /note="PPR 9"
FT REPEAT 365..399
FT /note="PPR 10"
FT REPEAT 400..434
FT /note="PPR 11"
FT REPEAT 435..469
FT /note="PPR 12"
FT REPEAT 470..504
FT /note="PPR 13"
FT REPEAT 505..539
FT /note="PPR 14"
FT REPEAT 540..573
FT /note="PPR 15"
FT REPEAT 574..608
FT /note="PPR 16"
FT REPEAT 609..643
FT /note="PPR 17"
FT REPEAT 644..678
FT /note="PPR 18"
FT REPEAT 679..713
FT /note="PPR 19"
FT REPEAT 714..748
FT /note="PPR 20"
FT REPEAT 749..783
FT /note="PPR 21"
FT REPEAT 784..818
FT /note="PPR 22"
FT REPEAT 819..853
FT /note="PPR 23"
FT REPEAT 854..891
FT /note="PPR 24"
SQ SEQUENCE 940 AA; 105560 MW; 5F8922D0128AFD5D CRC64;
MIMIRIWNNY KGKYRFFLSN CRSFSSIKRP QIPESEETSL SITQRRFDPD LAPIKTRVYV
SLFHTLFRLY LSCERLYGAA RTLSAMCTFG VVPDSRLWNS LIHQFNVNGL VHDQVSLIYS
KMIACGVSPD VFALNVLIHS FCKVGRLSFA ISLLRNRVIS IDTVTYNTVI SGLCEHGLAD
EAYQFLSEMV KMGILPDTVS YNTLIDGFCK VGNFVRAKAL VDEISELNLI THTILLSSYY
NLHAIEEAYR DMVMSGFDPD VVTFSSIINR LCKGGKVLEG GLLLREMEEM SVYPNHVTYT
TLVDSLFKAN IYRHALALYS QMVVRGIPVD LVVYTVLMDG LFKAGDLREA EKTFKMLLED
NQVPNVVTYT ALVDGLCKAG DLSSAEFIIT QMLEKSVIPN VVTYSSMING YVKKGMLEEA
VSLLRKMEDQ NVVPNGFTYG TVIDGLFKAG KEEMAIELSK EMRLIGVEEN NYILDALVNH
LKRIGRIKEV KGLVKDMVSK GVTLDQINYT SLIDVFFKGG DEEAALAWAE EMQERGMPWD
VVSYNVLISG MLKFGKVGAD WAYKGMREKG IEPDIATFNI MMNSQRKQGD SEGILKLWDK
MKSCGIKPSL MSCNIVVGML CENGKMEEAI HILNQMMLME IHPNLTTYRI FLDTSSKHKR
ADAIFKTHET LLSYGIKLSR QVYNTLIATL CKLGMTKKAA MVMGDMEARG FIPDTVTFNS
LMHGYFVGSH VRKALSTYSV MMEAGISPNV ATYNTIIRGL SDAGLIKEVD KWLSEMKSRG
MRPDDFTYNA LISGQAKIGN MKGSMTIYCE MIADGLVPKT STYNVLISEF ANVGKMLQAR
ELLKEMGKRG VSPNTSTYCT MISGLCKLCT HPDVEWNKKA MYLAEAKGLL KEMVEEKGYI
PCNQTIYWIS AAFSKPGMKV DAERFLKECY KKKNARSSNS
