PP382_ARATH
ID PP382_ARATH Reviewed; 598 AA.
AC Q9LEQ7;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 25-MAY-2022, entry version 102.
DE RecName: Full=Pentatricopeptide repeat-containing protein At5g14820, mitochondrial;
DE Flags: Precursor;
GN OrderedLocusNames=At5g14820; ORFNames=T9L3_120;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130714; DOI=10.1038/35048507;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA Bevan M., Fransz P.F.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AL391149; CAC01881.1; -; Genomic_DNA.
DR EMBL; CP002688; AED92080.1; -; Genomic_DNA.
DR PIR; T51427; T51427.
DR RefSeq; NP_196986.1; NM_121486.2.
DR AlphaFoldDB; Q9LEQ7; -.
DR SMR; Q9LEQ7; -.
DR PaxDb; Q9LEQ7; -.
DR ProteomicsDB; 249007; -.
DR EnsemblPlants; AT5G14820.1; AT5G14820.1; AT5G14820.
DR GeneID; 831334; -.
DR Gramene; AT5G14820.1; AT5G14820.1; AT5G14820.
DR KEGG; ath:AT5G14820; -.
DR Araport; AT5G14820; -.
DR TAIR; locus:2185455; AT5G14820.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_20_1; -.
DR InParanoid; Q9LEQ7; -.
DR OMA; MEAGRVW; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9LEQ7; -.
DR PRO; PR:Q9LEQ7; -.
DR Proteomes; UP000006548; Chromosome 5.
DR Genevisible; Q9LEQ7; AT.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR Gene3D; 1.25.40.10; -; 3.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR033443; PPR_long.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF13041; PPR_2; 1.
DR Pfam; PF17177; PPR_long; 1.
DR TIGRFAMs; TIGR00756; PPR; 9.
DR PROSITE; PS51375; PPR; 10.
PE 2: Evidence at transcript level;
KW Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT TRANSIT 1..98
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 99..598
FT /note="Pentatricopeptide repeat-containing protein
FT At5g14820, mitochondrial"
FT /id="PRO_0000363519"
FT REPEAT 193..227
FT /note="PPR 1"
FT REPEAT 229..261
FT /note="PPR 2"
FT REPEAT 262..292
FT /note="PPR 3"
FT REPEAT 296..330
FT /note="PPR 4"
FT REPEAT 331..365
FT /note="PPR 5"
FT REPEAT 366..400
FT /note="PPR 6"
FT REPEAT 401..435
FT /note="PPR 7"
FT REPEAT 436..470
FT /note="PPR 8"
FT REPEAT 471..505
FT /note="PPR 9"
FT REPEAT 506..540
FT /note="PPR 10"
SQ SEQUENCE 598 AA; 68464 MW; C870FE86569CF6F3 CRC64;
MAAAPWLYLS RRRSSTQTSL RRFLICSSSF DADEFISSQS RVIGGRGEEE VRFSGALFSR
MIHSSTYHPY RQIPLPHSVQ LLDASLGCRG FSSGSSNVSD GCDEEVESEC DNDEETGVSC
VESSTNPEEV ERVCKVIDEL FALDRNMEAV LDEMKLDLSH DLIVEVLERF RHARKPAFRF
FCWAAERQGF AHDSRTYNSM MSILAKTRQF ETMVSVLEEM GTKGLLTMET FTIAMKAFAA
AKERKKAVGI FELMKKYKFK IGVETINCLL DSLGRAKLGK EAQVLFDKLK ERFTPNMMTY
TVLLNGWCRV RNLIEAARIW NDMIDHGLKP DIVAHNVMLE GLLRSMKKSD AIKLFHVMKS
KGPCPNVRSY TIMIRDFCKQ SSMETAIEYF DDMVDSGLQP DAAVYTCLIT GFGTQKKLDT
VYELLKEMQE KGHPPDGKTY NALIKLMANQ KMPEHGTRIY NKMIQNEIEP SIHTFNMIMK
SYFVARNYEM GRAVWDEMIK KGICPDDNSY TVLIRGLISE GKSREACRYL EEMLDKGMKT
PLIDYNKFAA DFHRGGQPEI FEELAQRAKF SGKFAAAEIF ARWAQMTRRR CKQRFMED