ID   PP386_ARATH             Reviewed;         623 AA.
AC   Q9LXE8;
DT   10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2000, sequence version 1.
DT   25-MAY-2022, entry version 110.
DE   RecName: Full=Pentatricopeptide repeat-containing protein At5g15340, mitochondrial;
DE   Flags: Precursor;
GN   Name=PCMP-H91; OrderedLocusNames=At5g15340; ORFNames=F8M21_230;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130714; DOI=10.1038/35048507;
RA   Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA   Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA   Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA   Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA   Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA   O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA   Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA   Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA   Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA   Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA   Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA   Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA   Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA   Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA   Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA   Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA   McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA   Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA   Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA   Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA   Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA   Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA   Bevan M., Fransz P.F.;
RT   "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL   Nature 408:823-826(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   GENE FAMILY.
RX   PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA   Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA   Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA   Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA   Taconnat L., Small I.;
RT   "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT   reveals their essential role in organelle biogenesis.";
RL   Plant Cell 16:2089-2103(2004).
CC   -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily. {ECO:0000305}.
CC   -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC       URL="https://ppr.plantenergy.uwa.edu.au";
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DR   EMBL; AL353993; CAB89344.1; -; Genomic_DNA.
DR   EMBL; CP002688; AED92151.1; -; Genomic_DNA.
DR   PIR; T49969; T49969.
DR   RefSeq; NP_197038.1; NM_121538.2.
DR   AlphaFoldDB; Q9LXE8; -.
DR   SMR; Q9LXE8; -.
DR   PaxDb; Q9LXE8; -.
DR   PRIDE; Q9LXE8; -.
DR   ProteomicsDB; 249267; -.
DR   EnsemblPlants; AT5G15340.1; AT5G15340.1; AT5G15340.
DR   GeneID; 831386; -.
DR   Gramene; AT5G15340.1; AT5G15340.1; AT5G15340.
DR   KEGG; ath:AT5G15340; -.
DR   Araport; AT5G15340; -.
DR   TAIR; locus:2150936; AT5G15340.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_0_1_1; -.
DR   InParanoid; Q9LXE8; -.
DR   OMA; EVAWTVM; -.
DR   OrthoDB; 1344243at2759; -.
DR   PhylomeDB; Q9LXE8; -.
DR   PRO; PR:Q9LXE8; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   ExpressionAtlas; Q9LXE8; baseline and differential.
DR   Genevisible; Q9LXE8; AT.
DR   GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   Gene3D; 1.25.40.10; -; 4.
DR   InterPro; IPR032867; DYW_dom.
DR   InterPro; IPR002885; Pentatricopeptide_repeat.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   Pfam; PF14432; DYW_deaminase; 1.
DR   Pfam; PF01535; PPR; 4.
DR   Pfam; PF13041; PPR_2; 1.
DR   TIGRFAMs; TIGR00756; PPR; 3.
DR   PROSITE; PS51375; PPR; 9.
PE   2: Evidence at transcript level;
KW   Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT   TRANSIT         1..16
FT                   /note="Mitochondrion"
FT                   /evidence="ECO:0000255"
FT   CHAIN           17..623
FT                   /note="Pentatricopeptide repeat-containing protein
FT                   At5g15340, mitochondrial"
FT                   /id="PRO_0000363523"
FT   REPEAT          42..72
FT                   /note="PPR 1"
FT   REPEAT          75..109
FT                   /note="PPR 2"
FT   REPEAT          110..144
FT                   /note="PPR 3"
FT   REPEAT          145..179
FT                   /note="PPR 4"
FT   REPEAT          180..206
FT                   /note="PPR 5"
FT   REPEAT          207..237
FT                   /note="PPR 6"
FT   REPEAT          243..277
FT                   /note="PPR 7"
FT   REPEAT          285..319
FT                   /note="PPR 8"
FT   REPEAT          320..346
FT                   /note="PPR 9"
FT   REPEAT          350..384
FT                   /note="PPR 10"
FT   REPEAT          385..419
FT                   /note="PPR 11"
FT   REGION          420..495
FT                   /note="Type E motif"
FT   REGION          496..526
FT                   /note="Type E(+) motif"
FT   REGION          527..623
FT                   /note="Type DYW motif"
SQ   SEQUENCE   623 AA;  70087 MW;  EE771FC2D33A42DB CRC64;
     MKCLSYQKVR LLLRHCAHRS FLRPGKELHA VLTTSGLKKA PRSYLSNALF QFYASSGEMV
     TAQKLFDEIP LSEKDNVDWT TLLSSFSRYG LLVNSMKLFV EMRRKRVEID DVSVVCLFGV
     CAKLEDLGFA QQGHGVAVKM GVLTSVKVCN ALMDMYGKCG LVSEVKRIFE ELEEKSVVSW
     TVVLDTVVKW EGLERGREVF HEMPERNAVA WTVMVAGYLG AGFTREVLEL LAEMVFRCGH
     GLNFVTLCSM LSACAQSGNL VVGRWVHVYA LKKEMMMGEE ASYDDVMVGT ALVDMYAKCG
     NIDSSMNVFR LMRKRNVVTW NALFSGLAMH GKGRMVIDMF PQMIREVKPD DLTFTAVLSA
     CSHSGIVDEG WRCFHSLRFY GLEPKVDHYA CMVDLLGRAG LIEEAEILMR EMPVPPNEVV
     LGSLLGSCSV HGKVEIAERI KRELIQMSPG NTEYQILMSN MYVAEGRSDI ADGLRGSLRK
     RGIRKIPGLS SIYVNDSVHR FSSGDRSHPR TKEIYLKLNE VIERIRSAGY VPDVSGLVSH
     SEGDLEEKEQ ALCCHSEKLA VCFGLLETKP STPLLVFKNL RICRDCHSAM KIVSKVYDRE
     IIIRDRNRFH QFKGGSCSCS DYW