ID   PP392_ARATH             Reviewed;         506 AA.
AC   Q3E9F0;
DT   10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT   08-NOV-2005, sequence version 1.
DT   25-MAY-2022, entry version 93.
DE   RecName: Full=Pentatricopeptide repeat-containing protein At5g18475;
GN   OrderedLocusNames=At5g18475; ORFNames=F20L16.2;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130714; DOI=10.1038/35048507;
RA   Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA   Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA   Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA   Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA   Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA   O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA   Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA   Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA   Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA   Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA   Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA   Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA   Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA   Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA   Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA   Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA   McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA   Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA   Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA   Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA   Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA   Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA   Bevan M., Fransz P.F.;
RT   "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL   Nature 408:823-826(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA   Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA   Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA   Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA   Shinozaki K.;
RT   "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL   Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   GENE FAMILY.
RX   PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA   Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA   Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA   Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA   Taconnat L., Small I.;
RT   "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT   reveals their essential role in organelle biogenesis.";
RL   Plant Cell 16:2089-2103(2004).
CC   -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC   -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC       URL="https://ppr.plantenergy.uwa.edu.au";
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DR   EMBL; AC069328; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; CP002688; AED92568.1; -; Genomic_DNA.
DR   EMBL; AK228588; BAF00503.1; -; mRNA.
DR   RefSeq; NP_974803.1; NM_203074.4.
DR   AlphaFoldDB; Q3E9F0; -.
DR   SMR; Q3E9F0; -.
DR   PaxDb; Q3E9F0; -.
DR   PRIDE; Q3E9F0; -.
DR   ProteomicsDB; 249273; -.
DR   EnsemblPlants; AT5G18475.1; AT5G18475.1; AT5G18475.
DR   GeneID; 2745987; -.
DR   Gramene; AT5G18475.1; AT5G18475.1; AT5G18475.
DR   KEGG; ath:AT5G18475; -.
DR   Araport; AT5G18475; -.
DR   TAIR; locus:1006230454; AT5G18475.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_49_0_1; -.
DR   InParanoid; Q3E9F0; -.
DR   OMA; VKHHCKN; -.
DR   OrthoDB; 1344243at2759; -.
DR   PhylomeDB; Q3E9F0; -.
DR   PRO; PR:Q3E9F0; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   ExpressionAtlas; Q3E9F0; baseline and differential.
DR   Genevisible; Q3E9F0; AT.
DR   Gene3D; 1.25.40.10; -; 5.
DR   InterPro; IPR002885; Pentatricopeptide_repeat.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   Pfam; PF12854; PPR_1; 1.
DR   Pfam; PF13041; PPR_2; 3.
DR   TIGRFAMs; TIGR00756; PPR; 7.
DR   PROSITE; PS51375; PPR; 10.
PE   2: Evidence at transcript level;
KW   Reference proteome; Repeat.
FT   CHAIN           1..506
FT                   /note="Pentatricopeptide repeat-containing protein
FT                   At5g18475"
FT                   /id="PRO_0000363529"
FT   REPEAT          88..122
FT                   /note="PPR 1"
FT   REPEAT          123..158
FT                   /note="PPR 2"
FT   REPEAT          159..194
FT                   /note="PPR 3"
FT   REPEAT          195..229
FT                   /note="PPR 4"
FT   REPEAT          231..266
FT                   /note="PPR 5"
FT   REPEAT          267..301
FT                   /note="PPR 6"
FT   REPEAT          302..336
FT                   /note="PPR 7"
FT   REPEAT          337..371
FT                   /note="PPR 8"
FT   REPEAT          372..406
FT                   /note="PPR 9"
FT   REPEAT          407..441
FT                   /note="PPR 10"
FT   REPEAT          442..476
FT                   /note="PPR 11"
FT   REPEAT          477..506
FT                   /note="PPR 12"
FT   REGION          28..48
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   506 AA;  57288 MW;  BF9C1FC800E2044D CRC64;
     MRFTTSIINE HRRFSSSSRS WVSPICFSEK KKKPSPPPES SISPVETNPK TKFISHESAV
     SLMKRERDPQ GVLDIFNKAS QQKGFNHNNA TYSVLLDNLV RHKKFLAVDA ILHQMKYETC
     RFQESLFLNL MRHFSRSDLH DKVMEMFNLI QVIARVKPSL NAISTCLNLL IDSGEVNLSR
     KLLLYAKHNL GLQPNTCIFN ILVKHHCKNG DINFAFLVVE EMKRSGISYP NSITYSTLMD
     CLFAHSRSKE AVELFEDMIS KEGISPDPVT FNVMINGFCR AGEVERAKKI LDFMKKNGCN
     PNVYNYSALM NGFCKVGKIQ EAKQTFDEVK KTGLKLDTVG YTTLMNCFCR NGETDEAMKL
     LGEMKASRCR ADTLTYNVIL RGLSSEGRSE EALQMLDQWG SEGVHLNKGS YRIILNALCC
     NGELEKAVKF LSVMSERGIW PHHATWNELV VRLCESGYTE IGVRVLIGFL RIGLIPGPKS
     WGAVVESICK ERKLVHVFEL LDSLVS